MétaCan
Menu
Back to cohort
Record W2072993627 · doi:10.1063/1.3696000

Compressed microtubules: Splitting or buckling

2012· article· en· W2072993627 on OpenAlexafffund
M. Z. Jin, C. Q. Ru

Bibliographic record

VenueJournal of Applied Physics · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicrotubule and mitosis dynamics
Canadian institutionsUniversity of Alberta
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBucklingMicrotubuleAxial symmetryMaterials scienceCompression (physics)ModulusMicromechanicsComposite materialPhysics

Abstract

fetched live from OpenAlex

Microtubule (MT) is the mechanically strongest cytoskeletal element in eukaryotic cells and plays a key role in maintaining cell’s geometrical shape by bearing compressive forces. MTs are highly dynamic, and “dynamic instability” is referred to the switch between polymerization and depolymerization phases (the latter is characterized by splitting of protofilaments at the plus end). A micromechanics model is proposed here to study whether an axially compressed microtubule, protected by a “cap” consisted of a few layers of strongly bonded GTP dimers at the plus end, can split prior to overall buckling. Our basic conclusion is that compression-driven splitting of a capped microtubule can happen prior to overall buckling when the microtubule is very short (typically shorter than few hundreds of nanometers). For example, compression-driven splitting from middle of a capped microtubule can happen prior to buckling when the length of microtubule is shorter than a few hundreds of nanometers. In addition, for capped microtubules shorter than 125−180 nm (depending on specific values of axial Young’s modulus and adhesion energy between protofilaments), mechanical compression will cause splitting of the microtubule at its plus end prior to overall buckling. On the other hand, however, for microtubules of length longer than 0.3−0.75 micron (depending on specific values of axial Young’s modulus and adhesion energy between protofilaments), the present model shows that a cap composed of even one single layer of GTP dimers is sufficient to prevent compression-driven splitting prior to buckling, in agreement with the known observations that dynamic instability or splitting of moderately long microtubules could happen only when the cap is completely lost at the plus end.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.001
Open science0.0010.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.251
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2012
Admission routes2
Has abstractyes

Explore more

Same venueJournal of Applied PhysicsSame topicMicrotubule and mitosis dynamicsFrench-language works237,207