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Corrigendum to âThe<i>csbX</i>gene of<i>Azotobacter vinelandii</i>encodes an MFS efflux pump required for catecholate siderophore exportâ [FEMS Microbiol. Lett. 228 (2004) 211â216]

2004· erratum· en· W2073013388 on OpenAlexaff
William Page, Elena Kwon, Anthony Cornish, Anne E. Tindale

Bibliographic record

VenueFEMS Microbiology Letters · 2004
Typeerratum
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsAzotobacter vinelandiiSiderophoreEffluxOperonGeneAeromonas hydrophilaMicrobiologyBiologyChemistryBiochemistryGeneticsBacteriaEscherichia coliNitrogenase

Abstract

fetched live from OpenAlex

In the above-mentioned article the following changes should be taken into account: Abstract, page 211, sentence 2 should read: Other proteins that were most similar to CsbX were found in Aeromonas hydrophila and in the catecholate siderophore biosynthesis operon of Stigmatella aurantiaca. and Results and discussion section, page 213, bottom of column 1 should read: (E value 4 × 10−48; 38% identity; GenBank number AAF63418.1) found in Aeromonas hydrophila [25]. Explanation When the manuscript was first written, the Abstract originally read ‘The other protein that was most similar to CsbX was found in the catecholate siderophore biosynthesis operon of Stigmatella aurantiaca’. A putative multi-drug efflux pump of Aeromonas hydrophila described by Zhang et al. (2000) in reference 25 was also very similar and we speculated that all three pumps may be involved in catecholate siderophore export (see Results and Discussion, p. 214, column 1). Unfortunately, the name ‘Aeromonas hydrophila’ was simply inserted into the phrase above so that the location of the putative efflux pump of A. hydrophila was incorrectly reported to be in the catecholate biosynthesis operon of A. hydrophila and this error was carried forward into the Results and discussion section. This led to the incorrect wording in the published manuscript (Abstract, page 211, sentence 2; and Results and discussion, page 213, bottom of column 1), while our speculation was only that the A. hydrophila pump might be involved in catecholate siderophore export. This does not change the results of our study and does not change our speculation about the similar roles of these pumps in Azotobacter vinelandii, A. hydrophila and S. aurantiaca.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.016
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.138
Threshold uncertainty score0.463

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.016
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0030.002
Science and technology studies0.0030.001
Scholarly communication0.0020.002
Open science0.0030.002
Research integrity0.0050.006
Insufficient payload (model declined to judge)0.1380.113

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.235
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2004
Admission routes1
Has abstractyes

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