MétaCan
Menu
Back to cohort
Record W2073618475 · doi:10.1080/15287390903084272

Structural Characterization of Amyloidotic Antifreeze Protein Fibrils and Intermediates

2009· article· en· W2073618475 on OpenAlexaff
Steffen P. Graether, Brian D. Sykes

Bibliographic record

VenueJournal of Toxicology and Environmental Health · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPrion Diseases and Protein Misfolding
Canadian institutionsUniversity of AlbertaUniversity of Guelph
Fundersnot available
KeywordsAntifreeze proteinCharacterization (materials science)ChemistryAntifreezeFibrilProtein foldingBiochemistryBiophysicsMaterials scienceBiologyNanotechnologyOrganic chemistry

Abstract

fetched live from OpenAlex

The propagation and detrimental effects of prion disease are thought to be associated with the amyloid-like prion fibrils or with other misfolded structures known as beta-oligomers. The freezing and thawing of high concentrations of an antifreeze protein result in fibrils that have morphological and structural properties similar to those of amyloid. The method to produce these amyloid-like fibrils is expanded upon in this study. Data showed that the C-terminal end of the protein retains its alpha-helical character even in the amyloid state, and that changing the pH of the protein solution from 4 to 8 resulted in gels that resemble the beta-oligomeric form. These interim results provide the conditions for further elucidating the structure of these fibrils and their intermediate states.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.000
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.240
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2009
Admission routes1
Has abstractyes

Explore more

Same venueJournal of Toxicology and Environmental HealthSame topicPrion Diseases and Protein MisfoldingFrench-language works237,207