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Record W2074946263 · doi:10.2135/cropsci2008.04.0239

Genetic Variation within and among Wildrye (<i>Elymus canadensis</i> and <i>E. virginicus</i>) Populations from the Southern Great Plains

2009· article· en· W2074946263 on OpenAlexaboutno aff
Malay C. Saha, Carolyn A. Young, A. Hopkins

Bibliographic record

VenueCrop Science · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant and fungal interactions
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyElymusGermplasmGenetic diversityHordeum vulgareBotanyPopulationPoaceae

Abstract

fetched live from OpenAlex

There is interest in Canada wildrye (CWR, Elymus canadensis L.) and Virginia wildrye (VWR, E. virginicus L.) for conservation and forage uses. Our objectives were to identify a set of molecular markers to assess genetic structure within and diversity among populations of CWR and VWR from the Southern Great Plains and to determine if these populations had an associated fungal endophyte. Nine CWR and five VWR populations and two barley ( Hordeum vulgare L.) cultivars were genotyped using simple sequence repeat (SSR) markers isolated from tall fescue [ Lolium arundinaceum (Schreb.) Darbysh.] expressed sequence tags (TF ESTs). Scorable fragments were produced by 31% of TF EST‐SSRs tested, thus identifying a set of SSR markers for wildrye. Populations grouped into three clusters consisting of (i) three wild populations, one plant introduction, and two commercial sources of CWR; (ii) all VWR populations and three CWR plant introductions; and (iii) barley cultivars. Clustering indicated possible gene flow between CWR and VWR. Genetic variation within populations was minimal and comparable to that of the barley cultivars. Thus, unlike many ancestral cultivars and landraces of self‐pollinated crops, CWR and VWR populations consisted of essentially pure lines and can be handled as such in a breeding program. Potentially sexual and asexual epichloë endophytes were found in several populations, indicating the need to account for endophytes in breeding and germplasm conservation efforts of wildrye.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.668
Threshold uncertainty score0.994

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.213
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2009
Admission routes1
Has abstractyes

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