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PHYLOGENETICS OF <i>RHINODINIUM BROOMEENSE</i> GEN. ET SP. NOV., A PERIDINIOID, SAND‐DWELLING DINOFLAGELLATE (DINOPHYCEAE)<sup>1</sup>

2006· article· en· W2075049825 on OpenAlexaff
Shauna A. Murray, Mona Hoppenrath, Angelika Preisfeld, Jacob Larsen, Sadaaki Yoshimatsu, Saburo Toriumi, David J. Patterson

Bibliographic record

VenueJournal of Phycology · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtist diversity and phylogeny
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsDinophyceaeBiologyGenusDinoflagellatePhylogeneticsPhylogenetic treeZoologyBotanyPaleontologyEcology

Abstract

fetched live from OpenAlex

The phylogeny of Rhinodinium broomeense , a new genus and species of heterotrophic peridinioid dinoflagellates, has been studied based on morphological and molecular genetic data. The genus was found in tidal marine sand habitats in Broome, north‐western Australia, and from three marine sand habitats in Japan. The thecal plate formula is Po 3′ 1 a 5″ 4c ?s 5″′ 1″″. A large apical hook points toward the dorsal side. Its plate pattern is similar to species of the genus Roscoffia ; however, it differs from that genus in its much larger epitheca, narrow cingulum, which could be interpreted as incomplete, the narrow sulcus without sulcal lists on both sides, and the strong oblique lateral compression. Phylogenetic analyses using partial LSU rDNA sequences, as well as plate pattern information, support the placement of this genus in the Peridiniales; however, it is sufficiently different from other genera that the family affinity remains unclear.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.065
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.227
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2006
Admission routes1
Has abstractyes

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