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Record W2075883273 · doi:10.5339/qfarf.2010.bmps6

Calreticulin mediated control of polycystin-2 expression

2010· article· en· W2075883273 on OpenAlexaff
Amit Abraham, Emine Turgut-Neary, Hala Omar, Hamid Massaeli, Nasrin Mesaeli

Bibliographic record

VenueQatar Foundation Annual Research Forum Proceedings · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and Kidney Cyst Diseases
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsCalreticulinEndoplasmic reticulumSTIM1Cell biologyBiologyWestern blotVascular smooth muscleEndocrinologyBiochemistryGene

Abstract

fetched live from OpenAlex

Abstract Polycystin-2 or transient receptor potential polycystic 2 (TRPP2) is a membrane glycoprotein that is encoded for by the gene pkd-2, which accounts for ˜15% of autosomal dominant polycystic kidney disease. TRPP2 is an independent non selective cation channel localized to either the plasma membrane or the endoplasmic reticulum (ER) that is involved in diverse cellular functions including control of cell cycle, cell wall synthesis, left-right symmetry, cardiac & renal development and mating behavior. In addition, it interacts with polycystin-1 that regulates different cell signaling pathways including JAK/STAT. As a trans-membrane protein, polycystin-2 is expressed, folded and matured in the endoplasmic reticulum. To date no data is available about the nature of endoplasmic reticulum which is responsible for the proper folding of polycystin-2. This led us to the hypothesis that calreticulin, an endoplasmic reticular calcium binding chaperone protein, is involved in stabilizing and transporting polycystin-2 to the plasma membrane. To test this hypothesis we examined changes in polycystin expression and localization in wild type and calreticulin deficient cells using western blot analysis, and immunocytochemistry. Furthermore, western blot and immunohistochemical analyses were used to examine changes in polycystin expression and localization upon calreticulin over expression in vascular smooth muscle and endothelial cells of transgenic mice. Our data showed that over expression of calreticulin in either vascular smooth muscle cells or endothelial cells of transgenic mice results in the development of multiple clear cysts in the kidney cortex of these mice. Histopathological analysis of these kidneys resembles those of human polycystic kidney disease. Furthermore, loss of calreticulin function resulted in altered polycystin-2 expression in the mouse embryonic fibroblast cell lines. However, there were no significant changes in the localization of polycystin-2 protein in calreticulin deficient cells when compared to the wild type cells. Our data supports a possible role for calreticulin in the expression of polycystin-2. Further research is warranted to elucidate the role of calreticulin as a chaperone or regulator of calcium homeostasis in the expression of polycystin-2.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.227
Threshold uncertainty score0.526

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.320
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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