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Record W2076330467 · doi:10.1117/12.816622

Surface plasmon resonance biosensing toward real biological sample analysis

2009· article· en· W2076330467 on OpenAlexafffund
Audrey Cunche, Olivier R. Bolduc, Jean‐François Masson

Bibliographic record

VenueProceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced biosensing and bioanalysis techniques
Canadian institutionsUniversité de Montréal
FundersUniversité de MontréalFonds Québécois de la Recherche sur la Nature et les Technologies
KeywordsBiosensorSurface plasmon resonanceMonolayerAdsorptionAmino acidPeptideChemistryCombinatorial chemistryThiolAlkylSide chainProtein adsorptionOrganic chemistryMaterials scienceNanotechnologyBiochemistryPolymerNanoparticle

Abstract

fetched live from OpenAlex

The development of monolayer chemistry based on amino acid and short peptides decreases significantly the nonspecific adsorption from biological samples such as serum. Nonspecific adsorption of proteins onto the surface of biosensors currently limits the applicability of many biosensing techniques in real biological samples. In order to minimize this problem, a methodology to immobilize short peptides on surface plasmon resonance (SPR) biosensors was developed using a short chain alkyl thiol monolayer derived with the selected peptides. The chain length of the alkane thiol linking the amino acid to the gold surface influences the physico-chemical properties of the layer and the amount of nonspecifically adsorbed proteins. Varying the composition of the monolayer with peptides formed from the natural amino acids investigates the physico-chemical properties required to minimize nonspecific adsorption of serum. It was observed from monolayers of single amino acids that the composition of the side chain of the amino acid greatly influences the resistance to nonspecific adsorption, with more polar, ionic and small chains resulting in an improved performance in biological samples. Building peptides of different lengths resulted in a further decrease of the amount of nonspecifically bound proteins from serum. Leaving the terminal carboxylic acid end of the peptide unreacted provides an anchoring point for a molecular receptor in the design of a biosensor. Biosensing will be demonstrated with a model system of β-lactamase.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.257
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes2
Has abstractyes

Explore more

Same venueProceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE→Same topicAdvanced biosensing and bioanalysis techniques→French-language works237,207→