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Record W2078070905 · doi:10.1139/b08-003

Cell wall architecture of <i>Physcomitrella patens</i> is revealed by atomic force microscopy

2008· article· en· W2078070905 on OpenAlexaffvenue
Haley D.M. Wyatt, Tanya E. S. Dahms

Bibliographic record

VenueBotany · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBiocrusts and Microbial Ecology
Canadian institutionsUniversity of Regina
Fundersnot available
KeywordsPhyscomitrella patensUltrastructureApical cellBiologyCell wallProtein filamentTip growthBiophysicsMicroscopyBotanyCellOpticsPhysicsBiochemistry

Abstract

fetched live from OpenAlex

The moss Physcomitrella patens (Hedw.) Bruch & Schimp. in B.S.G. serves as a nonvascular plant model system suitable for studying many plant developmental phenomena. The tip-growing filamentous protonemal stage of its life cycle exhibits polarized growth and various tropic responses. Conventional staining and light microscopy (LM) were used to provide the first direct evidence that protonemal cells of P. patens lack a cuticle. Atomic force microscopy (ATM) images reveal detailed surface structures identified by scanning electron microscopy (SEM). The cell wall ultrastructure is characterized by rounded protrusions that are uniformly distributed along each caulonemal filament, and longer fibrillar structures, which are disorganized at the apex, but become oriented in longitudinal arrays parallel to the growth axis in more proximal regions of caulonemal apical cells. The subapical cells are characterized by a polylamellated texture. There was no difference in gross surface ultrastructure between light-grown and dark-grown filaments, but the dimensions of the rounded protrusions at the apices of caulonemata cultured in the light and in darkness were significantly different. The convex and concave cell wall surfaces of a curved, gravitropically responding dark-grown caulonema appear structurally different. This investigation is the first to use AFM to probe the cell wall ultrastructure of a bryophyte. The data further elaborate a simple model of cell wall development in the caulonemata of P. patens that was proposed for other tip-growing filamentous plants.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.185
Teacher spread0.177 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2008
Admission routes2
Has abstractyes

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