MétaCan
Menu
Back to cohort
Record W2079448455 · doi:10.2135/cropsci2000.4061755x

Tracing the Phylogeny of the Hexaploid Oat <i>Avena sativa</i> with Satellite DNAs

2000· article· en· W2079448455 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueCrop Science · 2000
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsUniversity of Saskatchewan
Fundersnot available
KeywordsBiologyPolyploidAvenaPloidyGenomeMinisatelliteSatellite DNAPhylogenetic treeBotanyMicrosatellitePhylogeneticsGeneticsLineage (genetic)Evolutionary biologyAlleleGene

Abstract

fetched live from OpenAlex

The genus Avena contains 30 different species from diploid through tetraploid to hexaploid with different genome compositions. Research regarding the origin of the different genomes in the polyploid species has been inconclusive. The objectives of this research were to investigate the phylogenetic relationships of the Avena species by means of polymorphisms in satellite, minisatellite, and microsatellite DNA. A satellite DNA sequence, ASS49, was isolated from a microsatellite‐enriched library of the hexaploid oat Avena sativa L. Southern hybridization showed that ASS49 was a species‐specific rather than a genome‐specific satellite. ASS49 was able to distinguish species that may be the diploid and tetraploid progenitors of hexaploid oat. The phylogenetic relationship of Avena species was further investigated using 40 microsatellite and four minisatellite primers. These results appeared to support the findings with ASS49. It appears that the Ac‐genome diploid species ( A. canariensis Baum Raj. et Samp.) is the progenitor and A‐genome donor of the hexaploid oat rather than the generally believed As‐genome species ( A. strigosa Schreber). Instead, A. strigosa appears to be a member of a separate lineage of diploid and tetraploid species including the tetraploid species A. abyssinica Hochst.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.594
Threshold uncertainty score0.450

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.195
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it