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Record W2079467024 · doi:10.1186/1756-8935-6-s1-p33

Estrogen induced downregulation of gene expression and cell biological processes critical for genital tubercle formation via DNA methylation

2013· article· en· W2079467024 on OpenAlex
Jiaxin Jiang, Karen Aitken, Tyler Kirwan, Sevan Hopyan, Darius Bägli

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueEpigenetics & Chromatin · 2013
Typearticle
Languageen
FieldMedicine
TopicUrological Disorders and Treatments
Canadian institutionsHospital for Sick ChildrenUniversity of Toronto
Fundersnot available
KeywordsEpigeneticsDNA methylationBiologyGeneDownregulation and upregulationMethylationHypospadiasGeneticsRegulation of gene expressionGene expressionAndrologyMedicine

Abstract

fetched live from OpenAlex

Background Hypospadias is one of the most common genital birth defect, characterized by improper closing of the urethral folds during development and resulting ectopic opening of the urethra. Xenoestrogen (XE) exposure increases the rate of hypospadias in both animal models and in humans, in association with gene down regulation.[1,2] While many genes (e.g. SHH, WNT5A, CTNNB1, HOXA13) are critical for genital tubercle (GT) and urethral development in genetically deficient models, the role of such genes in response to estrogen exposure in GTs has been less studied. While XE exert known epigenetic effects, the mechanism involved is not clear. This study examines the epigenetic effects of XE on GT developmental genes, as well as on DNA methylation enzymes (DNMTs) involved in epigenetic downregulation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.191
Threshold uncertainty score0.390

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.278
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it