MétaCan
Menu
Back to cohort
Record W2080036080 · doi:10.1194/jlr.r009720

Genetic determinants of plasma triglycerides

2010· review· en· W2080036080 on OpenAlexafffund
Christopher T. Johansen, Sekar Kathiresan, Robert A. Hegele

Bibliographic record

VenueJournal of Lipid Research · 2010
Typereview
Languageen
FieldMedicine
TopicLipid metabolism and disorders
Canadian institutionsWestern University
FundersCanadian Institutes of Health ResearchOntario GenomicsOntario Genomics InstituteGenome CanadaHeart and Stroke Foundation of Canada
KeywordsGenome-wide association studyHypertriglyceridemiaGenetic variationBiologyComputational biologyGenetic associationGeneGeneticsBioinformaticsPopulationTriglycerideMedicineSingle-nucleotide polymorphismEndocrinologyGenotypeCholesterol

Abstract

fetched live from OpenAlex

Plasma triglyceride (TG) concentration is a complex polygenic trait that follows a rightward-skewed distribution in the population ( Fig. As a clinical measurement, it integrates multiple TG-rich lipoprotein (TRL) species that circulate in plasma, predominantly intestinally synthesized chylomicrons (CMs) in the postprandial state and hepatically synthesized very low density lipoproteins (VLDL) in the fasted state. Epidemiological evidence indicates that plasma TG concentration is a strong independent risk factor for cardiovascular disease (CVD), suggesting that prolonged residence of plasma TRLs, especially in the postprandial state, may contribute to CVD susceptibility ( 1-7 ). Together with environmental infl uences, common and rare variants in multiple genes may collectively determine a patient's plasma TG concentration. Identifying genes and genetic variants associated with plasma TG concentration will enrich our understanding of biochemical pathways involved in TRL metabolism, enabling identifi cation of Abstract Plasma triglyceride (TG) concentration is reemerging as an important cardiovascular disease risk factor. More complete understanding of the genes and variants that modulate plasma TG should enable development of markers for risk prediction, diagnosis, prognosis, and response to therapies and might help specify new directions for therapeutic interventions. Recent genome-wide association studies (GWAS) have identifi ed both known and novel loci associated with plasma TG concentration. However, genetic variation at these loci explains only 10% of overall TG variation within the population. As the GWAS approach may be reaching its limit for discovering genetic determinants of TG, alternative genetic strategies, such as rare variant sequencing studies and evaluation of animal models, may provide complementary information to fl esh out knowledge of clinically and biologically important pathways in TG metabolism. Herein, we review genes recently implicated in TG metabolism and describe how some of these genes likely modulate plasma TG concentration. We also discuss lessons regarding plasma TG metabolism learned from various genomic and genetic experimental approaches. Treatment of patients with moderate to severe hypertriglyceridemia with existing therapies is often challenging; thus, gene products and pathways found in recent genetic research studies provide hope for development of more effective clinical strategies. -

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.015

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.166
GPT teacher head0.477
Teacher spread0.311 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations262
Published2010
Admission routes2
Has abstractyes

Explore more

Same venueJournal of Lipid ResearchSame topicLipid metabolism and disordersFrench-language works237,207