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Record W2081989102 · doi:10.1145/2508037.2508049

Validation of an ontological medical decision support system for patient treatment using a repository of patient data

2013· article· en· W2081989102 on OpenAlexafffund
Atif Khan, John A. Doucette, Robin Cohen

Bibliographic record

VenueACM Transactions on Intelligent Systems and Technology · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiomedical Text Mining and Ontologies
Canadian institutionsUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsComputer scienceProbabilistic logicDecision support systemMisinformationContext (archaeology)Artificial intelligenceData science

Abstract

fetched live from OpenAlex

In this article, we begin by presenting OMeD, a medical decision support system, and argue for its value over purely probabilistic approaches that reason about patients for time-critical decision scenarios. We then progress to present Holmes, a Hybrid Ontological and Learning MEdical System which supports decision making about patient treatment. This system is introduced in order to cope with the case of missing data. We demonstrate its effectiveness by operating on an extensive set of real-world patient health data from the CDC, applied to the decision-making scenario of administering sleeping pills. In particular, we clarify how the combination of semantic, ontological representations, and probabilistic reasoning together enable the proposal of effective patient treatments. Our focus is thus on presenting an approach for interpreting medical data in the context of real-time decision making. This constitutes a comprehensive framework for the design of medical recommendation systems for potential use by medical professionals and patients both, with the end result being personalized patient treatment. We conclude with a discussion of the value of our particular approach for such diverse considerations as coping with misinformation provided by patients, performing effectively in time-critical environments where real-time decisions are necessary, and potential applications facilitating patient information gathering.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.018
metaresearch head score (Gemma)0.054
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.018
Threshold uncertainty score0.096

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0180.054
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0040.003
Open science0.0020.003
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.303
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2013
Admission routes2
Has abstractyes

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Same venueACM Transactions on Intelligent Systems and TechnologySame topicBiomedical Text Mining and OntologiesFrench-language works237,207