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Record W2087172499 · doi:10.2135/cropsci2001.412527x

Molecular Markers Linked to Brown Stem Rot Resistance Genes, <i>Rbs<sub>1</sub></i> and <i>Rbs<sub>2</sub></i>, in Soybean

2001· article· en· W2087172499 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueCrop Science · 2001
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoybean genetics and cultivation
Canadian institutionsMonsanto (Canada)
Fundersnot available
KeywordsBiologyGermplasmGeneticsGeneQuantitative trait locusPopulationGenetic markerPhenotypic traitMolecular markerMarker-assisted selectionPhenotypePlant disease resistanceStem rotHorticulture

Abstract

fetched live from OpenAlex

Brown stem rot (BSR) of soybean [ Glycine max (L.) Merr.] is caused by the fungal pathogen Phialophora gregata (Allington &amp; D.W. Chamberlain) W. Gams and occurs in soybean production areas around the world. Brown stem rot resistance genes Rbs 1 , Rbs 2 , and Rbs 3 have been identified in soybean germplasm and plant introductions through traditional genetic analyses. Resistance to BSR has been shown to reduce yield losses in soybean, but selection for this trait is laborious and confounded by environmental variation. The objectives of this study were to identify molecular markers linked to BSR resistance genes Rbs 1 and Rbs 2 , and map these genes in the soybean genome. Genetic families of populations segregating for Rbs 1 and Rbs 2 were evaluated in the greenhouse for BSR phenotypic reaction and identified as resistant, segregating, or susceptible. Leaf tissue collected from members of F 2:3 families was bulked and DNA simple sequence repeat (SSR) marker analysis was used to identify markers that cosegregated with BSR reaction phenotypes. Five pairs of Rbs 2 near‐isogenic lines were subjected to a similar analysis to verify results obtained from marker analysis conducted on the population segregating for Rbs 2 Results of marker analyses indicated that SSR markers Satt215 and Satt431 were linked to Rbs 1 and that Satt244 and Satt431 were linked to Rbs 2 Marker‐assisted selection in the Rbs 1 (using Satt431) and Rbs 2 (using Satt244) populations would have correctly predicted 88 and 82%, respectively, of the BSR reaction phenotypes. The Rbs 1 and Rbs 2 loci map to Molecular Linkage Group J and lie in a region known to contain Rbs 3 This region also contains loci conditioning resistance to taxonomically diverse fungal pathogens and a locus affecting nodulation in response to a bacterial symbiont.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.289
Threshold uncertainty score0.616

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.208
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it