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Record W2094803421 · doi:10.1074/jbc.x400007200

Reminiscences of Leon A. Heppel

2004· article· de· W2094803421 on OpenAlex
Leon Heppel

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aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
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Bibliographic record

VenueJournal of Biological Chemistry · 2004
Typearticle
Languagede
FieldChemistry
TopicVarious Chemistry Research Topics
Canadian institutionsnot available
Fundersnot available
KeywordsCorporationManagementVice presidentPlan (archaeology)EngineeringHistoryEconomic historyClassicsSociologyPolitical scienceLawEconomicsArchaeology

Abstract

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My parents were converted Mormons who had emigrated from Germany to Utah planning to live on a farm. The oldest of five children, I was born in Granger, Utah, in 1912. Farm life proved difficult and after 10 years our family moved to San Francisco. There, the city encouraged interesting local activities particularly for poor people, and life was more pleasant than in Utah. In school, I became interested in chemistry. While a high school student, my mother, who was ambitious on my behalf, persuaded John Stauffer, president of Stauffer Chemical Company, to give me a job doing analytical work at the American Cream Tartar Company in San Francisco. This supported me through high school and afterward when I enrolled at the University of California, Berkeley to major in chemistry and chemical engineering. Unhappily, my job at the American Cream Tartar Company and the support it provided did not last. In 1931, the Stauffer Chemical Company merged with the Schilling Spice Corporation and the combined company owned American Cream Tartar. A vice president of Schilling Spice undertook to effect economies, but the only economy he could find was getting rid of me. Shocked and urged by my mother to plead my case, I told the vice president how much I depended on the job. His cold reply was, “You need Schilling Spice Company but does Schilling Spice need you?” I never forgot those cruel words. Because of them, I abandoned my plan to be a chemical engineer turning instead to physiological biochemistry, which I thought would be a gentler profession. Fortunately I received a fellowship that allowed me to complete a B.S. degree in 1933. That same year I entered Berkeley's graduate school as a biochemistry student. Living in midtown San Francisco and commuting each day to Berkeley was a tiring chore. The Bay Bridges had not been built. In early morning, I took a streetcar to the Ferry Building where I boarded a boat for Oakland; on good days this took half an hour, but if the fog was intense, it was a much longer trip. From Oakland an electric train went to Berkeley and the university. In midafternoon, I returned across the Bay and spent a few hours working in one of the several Stauffer Chemical factories. Aside from the commute, however, life and science in Berkeley were exciting. During this period, Ernest O. Lawrence and others were doing great work and were anxious to talk about it. I made good friends among the chemists, one of whom discovered 14C (Martin D. Kamen in 1940). Nutrition was a major subfield of biochemistry in the 1930s, and I decided to do my thesis in that subject under Professor C. L. A. Schmidt. Schmidt was harsh and domineering but helpful. In later years when he became dean of the College of Pharmacy at the University of California, San Francisco, he hired my mother to take charge of equipment and supplies. For my thesis research, I decided to work on potassium (K+) metabolism in white rats. The experiments showed that K+ was essential for the growth and survival of young rats, and there was some evidence that sodium (Na+) could partially replace K+. Rubidium (Rb+) supported good growth in K+-free diets for a month, but thereafter the rats developed sudden tremors and died. My Ph.D. degree in biochemistry was awarded in 1937, a year when there were no jobs available for a biochemist. Luckily, Schmidt came to my rescue. He remembered a promise that George Whipple had made when he left Berkeley to start a new medical school in Rochester, New York. Whipple had told Schmidt that if he ever had a Ph.D. student who decided to come to medical school in Rochester, the student would receive partial support from the school. Right after receiving the Ph.D., I boarded a train for Rochester. Good fortune in the shape of a mentor came my way in Rochester. My work at Berkeley had attracted the attention of W. O. Fenn, a brilliant young physiologist who was a very quiet person and unusually kind. Fenn spent much of the day doing experiments with the help of a cheerful but somewhat talkative young woman. He gave me a position and suggested that I continue to study K+ metabolism in young rats. My initial results replicated my earlier finding that the rats grew well for a while when Rb+ replaced dietary K+ but then quickly developed tremors and died. In the early phase, although the rats appeared to be healthy, 7.5% of their muscle K+ was replaced by rubidium. Other experiments demonstrated that Na+ could replace K+ to some extent, and studies with radioisotopes confirmed that K+ and Na+ were able to cross an animal cell membrane. This was an astonishing finding, as German physiologists believed that the lipid cell membrane prevented passage of hydrophilic metal ions. Thanks to the generous spirit of Fenn, I was the sole author on three papers describing this work (1Heppel L.A. The electrolytes of muscle and liver in potassium-depleted rats.Am. J. Physiol. 1939; 127: 385Crossref Google Scholar, 2Heppel L.A. The diffusion of radioactive sodium into the muscles of potassium-deprived rats.Am. J. Physiol. 1940; 128: 449Crossref Google Scholar, 3Heppel L.A. Effect of age and diet on electrolyte changes in rat muscle during stimulation.Am. J. Physiol. 1940; 128: 440Crossref Google Scholar). By 1942 when I completed the M.D. degree and internship at Rochester, my work there had drawn considerable attention, and I received three offers for assistant residency positions from schools where interest in electrolytes was great: Yale Medical School with John Peters, Columbia University with Robert Loeb, and San Francisco Medical School. However, the entry of the United States into World War II interrupted normal, peacetime activities. Arthur Kornberg, a close medical school friend, and I joined the United States Public Health Service. Kornberg received sea duty while I was assigned to the National Institutes of Health (NIH). At NIH under orders from the Navy, I carried out tedious studies on the toxicity of halogenated hydrocarbons. Most importantly, the future began to take shape when I made a new friend, the enzymologist Bernard Horecker. Also, I persuaded Rolla E. Dyer, Director of NIH, to bring Kornberg to Bethesda. Together with Kornberg and Herbert Tabor and with the help of Horecker, I began to learn enzymology. Kornberg then left to spend a year (1946) in the laboratory of Severo Ochoa in New York and another (1947) with Gerty and Carl Cori in St. Louis. When he returned to NIH, he started a new research section for the study of enzymes and invited Horecker and me to join. Leaning on my background in toxicology, I began to examine the behavior of enzymes in toxic situations. Also, I investigated the metabolic reactions that convert inorganic nitrite to nitrate and nitroglycerines. I also purified inorganic pyrophosphatase and crystallized it with the help of Moses Kunitz (of the Rockefeller Institute (now University)) and purified 5′-nucleotidase. Then, in about 1951, my attention turned more generally to the phosphorylation and hydrolysis of purine ribonucleosides. This led, quite naturally, to an interest in enzymes that might hydrolyze RNA. Accordingly, my technician, Russell Hilmoe, and I purified from spleen an enzyme that partially solubilized RNA. The next step was to determine which linkages in RNA were split and which were resistant to the enzyme action. Roy Markham and J. D. Smith in Cambridge, England had demonstrated that fragments produced by RNA hydrolysis could be separated using paper chromatography and paper electrophoresis. Fortunately, I succeeded in obtaining a year's leave of absence from NIH, one of the first sabbaticals to be offered there, and spent a profitable year abroad in the laboratory of Markham. My work in England included the demonstration that the natural configuration of purine nucleotides in RNA was 3′–5′ rather than the alternative 2′–5′ (4Heppel L.A. Markham R. Hilmoe R.J. Natural configuration of the purine nucleotides in ribonucleic acids.Nature. 1953; 171: 1151Crossref PubMed Scopus (2) Google Scholar). Further evidence for this linkage was obtained from a study of the action of nucleases on mononucleotide esters carried out with Daniel Brown and Lord Alexander Todd (5Brown D.M. Heppel L.A. Hilmoe R.D. The action of some nucleases on simple esters of monoribonucleotides.J. Chem. Soc. 1954; 4576: 40Crossref Google Scholar). Also, the early steps in the hydrolysis of RNA by pancreatic ribonuclease were worked out in a collaboration with Paul R. Whitfeld (6Heppel L.A. Whitfeld P.R. Nucleotide exchange reactions catalyzed by ribonuclease and spleen phosphodiesterase. I. Synthesis and interconversion of simple esters of monoribonucleotides.Biochem. J. 1955; 60: 1Crossref PubMed Scopus (7) Google Scholar). This work lead to the isolation, by paper chromatography and paper electrophoresis, of cyclic terminal oligonucleotides. Whitfield, an Australian graduate student in the laboratory, was an excellent colleague in research and deserving of the credit he received when his name appeared on five of our publications (for example, Refs. 6Heppel L.A. Whitfeld P.R. Nucleotide exchange reactions catalyzed by ribonuclease and spleen phosphodiesterase. I. Synthesis and interconversion of simple esters of monoribonucleotides.Biochem. J. 1955; 60: 1Crossref PubMed Scopus (7) Google Scholar, 7Heppel L.A. Whitfeld P.R. Markham R. Nucleotide exchange reactions catalyzed by ribonuclease and spleen phosphodiesterase. II. Synthesis of polynucleotides.Biochem. J. 1955; 60: 8-15Crossref PubMed Scopus (22) Google Scholar, 8Heppel L.A. Whitfeld P.R. Markham R. A note on the structure of triphosphopyridine.Biochem. J. 1955; 60: 19Crossref PubMed Scopus (1) Google Scholar). Later on, I had an interesting interaction with Markham and Sutherland. Dr. Markham found that heating ATP with dilute alkali caused the formation of substantial quantities of a new compound whose properties puzzled him, as he related in a letter to me. At a later date, Dr. Sutherland wrote about a compound isolated from liver in minute quantities. It was biologically active. The two letters ended up in different parts of a pile of mail. However, one day I chanced to re-read both letters and I figured that these compounds were the same. This turned out to be so, and thus cyclic adenylic acid became readily available. I returned to NIH in January of 1954. Interesting and stimulating visitors began to come to the laboratory to learn techniques and collaborate. Henry Kaplan, a very distinguished Professor of Radiology at Stanford spent a sabbatical in the laboratory. Three joint papers were published with Horecker and Jerard Hurwitz, then a beginning researcher and now a distinguished biochemist. Jack Strominger was also a welcome visitor; the two of us, together with Elizabeth Maxwell, studied the phosphorylation of nucleoside monophosphates by nucleoside triphosphates. At this time, there was considerable interest in the results and methods I had obtained during my stay in England. A good deal of attention was being paid in particular to the demonstration that “synthetic” oligonucleotides could be synthesized by enzyme-catalyzed nucleotide exchange reactions (7Heppel L.A. Whitfeld P.R. Markham R. Nucleotide exchange reactions catalyzed by ribonuclease and spleen phosphodiesterase. II. Synthesis of polynucleotides.Biochem. J. 1955; 60: 8-15Crossref PubMed Scopus (22) Google Scholar). Before long, I learned about the discovery of polynucleotide phosphorylase in Azotobacter vinelandii by Marianne Grunberg-Manago and Ochoa at New York University. The same enzyme was independently discovered in Escherichia coli by Uri Littauer and Kornberg. At the time, I was one of only a few individuals who had the knowledge and experience required to study this enzyme and its products. Ochoa proposed that we collaborate and I accepted. Early in the course of the collaboration, a very able and pleasant postdoctoral fellow, Maxine Singer, joined my laboratory. She contributed greatly to the studies and made the association enjoyable. We put to good use all that I had learned in England about polyribonucleotides. One of our important findings was that short oligonucleotides could serve as primers for polynucleotide phosphorylase (9Singer M.F. Heppel L.A. Hilmoe R.J. Oligonucleotides as primers for polynucleotide phosphorylase.Biochim. Biophys. Acta. 1957; 26: 447Crossref PubMed Scopus (5) Google Scholar). Some time later, Singer and I used polynucleotide phosphorylase to prepare polyribonucleotides and oligoribonucleotides that Nirenberg used in his work on the genetic code. Singer continued to work on polynucleotide phosphorylase when she became an independent investigator. The elegant organic synthesis of oligonucleotides by Khorana was not available until a later period. Therefore, when working on the genetic code, it was an advantage to be able to use enzymatic methods. Russell Hilmoe remained my able and intelligent technician for many productive years; he was particularly good at adapting to new situations. Marie Lipsett, who had a good grasp of physical chemistry, joined the laboratory group; she collaborated with Dan Bradley on the study of complex formation between oligonucleotides and homopolymers. The flow of visitors continued as many people began to investigate nucleic acid enzymology. Littauer and I. R. (Bob) Lehman visited from Kornberg's department in St. Louis. Gobind Khorana's occasional visits were a joy as they gave me a chance to observe the development of his work and share in his good company as well as collaborate. Several times I also visited in Khorana's laboratory. Audrey Stevens was an especially brilliant postdoctoral fellow; all on her own she was one of the people who simultaneously discovered RNA polymerase. Altogether, it was an enjoyable and exciting time. After some years, however, I decided to turn to a different problem: the properties of bacterial membranes. Harold Neu, a medical postdoctoral fellow, joined me in the new investigations. The first problem he tackled was the location of ribonuclease in E. coli. At that time, a ribonuclease had been found associated with the 30 S ribosomes of the bacteria. Neu showed that the ribonuclease was actually in the periplasmic space between the cell membrane and the cell wall but binds to the 30 S ribosomes when the cell is split open (10Neu H.C. Heppel L.A. On the surface localization of enzymes in E. coli.Biochem. Biophys. Res. Commun. 1964; 17: 215Crossref PubMed Scopus (55) Google Scholar, 11Neu H.C. Heppel L.A. Some observations on the “latent” ribonuclease of Escherichia coli.Proc. Natl. Acad. Sci. U. S. A. 1964; 51: 1267Crossref PubMed Scopus (33) Google Scholar). With special care, it was possible to obtain ribosomes free of ribonuclease. Thus, the ribonuclease is a periplasmic enzyme with no connection to ribosomes. In the course of this work, Nancy Nossal, a postdoctoral fellow, contributed to the development of Neu's procedure for the osmotic shock of the cells (12Neu H.C. Heppel L.A. The release of enzymes from Escherichia coli by osmotic shock and during the formation of spheroplasts.J. Biol. Chem. 1965; 240: 3685Abstract Full Text PDF PubMed Google Scholar). The protocol made it possible to recover enzymes in high yield from the periplasmic space of Gram-negative bacteria. The procedure has since been used in many laboratories. Neu, and later others, discovered a number of other periplasmic enzymes, all located in the space between the cell membrane and cell wall. Anraku, a visitor from Japan, was very quiet but very effective and productive. He observed that Gram-negative bacteria able to transport d-galactose contain a specific periplasmic protein that can bind that sugar. A similar observation was made in the laboratory of Arthur Pardee. In the next few years, a large number of binding proteins were discovered in my laboratory and elsewhere. At NIH, several additional postdoctoral fellows contributed to this work. H. R. Dvorak, an M.D., had a special interest in metalloproteins. He and R. W. Brockman, a hard worker who visited the laboratory from Alabama, also worked on phosphatases released from E. coli by osmotic shock. In 1967, Efraim Racker induced me to join the Department of Biochemistry at Cornell University. The move was the beginning of more than 30 pleasant and productive years in Ithaca. The first postdoctoral fellow to join the laboratory, George Dietz, was an able and pleasant young man who studied the uptake of hexose phosphates by E. coli. Joel Weiner, a graduate student from Canada, and Clem Furlong, a postdoctoral fellow, worked on amino acid transport in E. coli including leucine-specific and glutamine-specific (13Weiner J.H. Heppel L.A. A binding protein for glutamine and its relation to transport in Escherichia Biol. Chem. Full Text PDF Google periplasmic binding was an especially good and was with equipment later became an of the a graduate student, carried out a study that there different of for the transport of and glutamine in E. coli of for the transport of and glutamine in Escherichia coli.Proc. Natl. Acad. Sci. U. S. A. PubMed Scopus Google this work received much of the early at Cornell was postdoctoral fellow He studied amino acid transport in E. another that a binding Other postdoctoral and visitors contributed to our of the periplasmic space and at the of which from ATP rather than an membrane. a similar for a very able worked on J. Smith and a graduate student, Paul purified the two of and their properties of membrane and of the from E. coli.Biochem. J. Scopus Google Scholar). I was able to help Smith during a when jobs were difficult to and was when he began doing independent work. made an interesting finding when he showed that the osmotic shock procedure does not the some cells and used their time in the laboratory and the E. coli of a from the isolated of E. coli Biol. Chem. Full Text PDF PubMed Google Scholar). from spent several postdoctoral years on work that evidence for metabolic that might be in In I decided to more experience in animal cell A sabbatical was and I spent it with Henry in In the years, I made additional visits of several each to the laboratory. On one of these I observed that which nucleotides when ATP is to the the effect is specific for excellent since studied this and I. and I this work in L.A. I. of cells in by Biol. Scopus Google Scholar). received his degree for the work in my laboratory in about The years in my laboratory included and showed that in of a few was a and this important effect of ATP in a of papers D. Heppel L.A. ATP is a for and cells and with other growth Natl. Acad. Sci. U. S. A. PubMed Scopus Google Scholar). I also to a few other people who were in my laboratory at times and whose collaboration I R. from a organic and the productive a graduate student and postdoctoral was a and hard came to the United States on a number of to learn he is a well Professor of and in his I was also to and to with as he developed into a in his In the early I was able to spend into short at NIH as a in the laboratory of It was good to be able to spend the day doing experiments at the is for being able to do experiments at the same time that she was the of Biochemistry in the National about on I and no for and included for the interested and these also similar work in other laboratories.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.020
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0020.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.301
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it