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Variation partitioning as a tool to distinguish between niche and neutral processes

2010· article· en· W2096315163 on OpenAlexfundno aff
Tyler Smith, Jeremy Lundholm

Bibliographic record

VenueEcography · 2010
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsnot available
FundersMcGill University
KeywordsNicheVariation (astronomy)EcologyNiche differentiationEvolutionary biologyBiology

Abstract

fetched live from OpenAlex

We assess the potential of different forms of variation partitioning to distinguish between environmental control and dispersal limitation in communities structured by combinations of niche and neutral processes. Simulation data reveal interactions between dispersal limitation, environmental control, and the spatial structure of environmental factors in the detected levels of variance fractions. The degree of dispersal limitation contributes to both the pure environmental and pure spatial variance partitions. This undermines the common practice of interpreting these partitions as direct expressions of niche and neutral processes, respectively. Furthermore, the proportion of variation attributed to environmental variation depends not only on the strength of environmental control, but also on the specific spatial configuration of the environmental variable. This has important implications for the interpretation of empirical studies. In particular, use of these analytical techniques to compare processes governing community structure among different study systems is unwarranted, as the results will reflect not only differences in the strength of the processes of interest, but also the influence of the unique spatial arrangement of the environmental variables in each system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.047
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.013
Threshold uncertainty score0.068

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.047
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0060.003
Science and technology studies0.0010.003
Scholarly communication0.0020.002
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.231
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations361
Published2010
Admission routes1
Has abstractyes

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