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Record W2103088765 · doi:10.3201/eid1407.080122

AIDS Patient Death Caused by Novel<i>Cryptococcus neoformans</i>×<i>C</i>.<i>gattii</i>Hybrid

2008· article· en· W2103088765 on OpenAlexaffabout
Marjan Bovers, Ferry Hagen, Eiko E. Kuramae, Hans L. Hoogveld, Françoise Dromer, G. St‐Germain, Teun Boekhout

Bibliographic record

VenueEmerging infectious diseases · 2008
Typearticle
Languageen
FieldMedicine
TopicFungal Infections and Studies
Canadian institutionsSte. Anne's Hospital
Fundersnot available
KeywordsCryptococcus gattiiCryptococcus neoformansCryptococcosisSerotypeMicrobiologyBiologyVirologyStrain (injury)

Abstract

fetched live from OpenAlex

Interspecies hybrids of Cryptococcus neoformans and C. gattii have only recently been reported.We describe a novel C. neoformans × C. gattii hybrid strain (serotype AB) that was previously described as C. gattii and that caused a lethal infection in an AIDS patient from Canada.C ryptococcus neoformans and C. gattii are pathogenic yeasts that may cause meningoencephalitis. C. neoformans primarily infects immunocompromised patients and occurs worldwide, whereas C. gattii primarily mainly infects otherwise healthy persons and has been thought to occur in subtropical regions (1-3).However, the recent outbreak of infection with C. gattii on Vancouver Island, British Columbia, Canada (4), expansion of this outbreak to mainland Canada and the Pacifi c Northwest region of the United States (5), and identifi cation of C. gattii isolates in Europe (6) show that C. gattii can also occur in temperate climates.Molecular techniques can distinguish 7 haploid genotypic groups within C. neoformans and C. gattii (7-9; F. Hagen and T. Boekhout, unpub.data).Recently, 3 serotype BD C. neoformans var.neoformans × C. gattii hybrids were isolated from 2 HIV-negative patients in the Netherlands (10).We describe a novel C. neoformans var.grubii serotype A × C. gattii serotype B hybrid that was isolated from an HIV-positive person.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.031
Threshold uncertainty score0.061

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.249
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations98
Published2008
Admission routes2
Has abstractyes

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