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Record W2106335950 · doi:10.1109/tit.2008.926315

Network Inference From Co-Occurrences

2008· article· en· W2106335950 on OpenAlexaff

Bibliographic record

VenueIEEE Transactions on Information Theory · 2008
Typearticle
Languageen
FieldPhysics and Astronomy
TopicComplex Network Analysis Techniques
Canadian institutionsMcGill University
Fundersnot available
KeywordsConvergence (economics)InferenceRandom walkRandom permutationPermutation (music)Monte Carlo methodRandom graphExponential growthBelief propagationStochastic process

Abstract

fetched live from OpenAlex

The discovery of networks is a fundamental problem arising in numerous fields of science and technology, including communication systems, biology, sociology, and neuroscience. Unfortunately, it is often difficult, or impossible, to obtain data that directly reveal network structure, and so one must infer a network from incomplete data. This paper considers inferring network structure from "co-occurrence" data: observations that identify which network components (e.g., switches, routers, genes) carry each transmission but do not indicate the order in which they handle the transmission. Without order information, the number of networks that are consistent with the data grows exponentially with the size of the network (i.e., the number of nodes). Yet, the basic engineering/evolutionary principles underlying most networks strongly suggest that not all data-consistent networks are equally likely. In particular, nodes that co-occur in many observations are probably closely connected. With this in mind, we model the co-occurrence observations as independent realizations of a random walk on the network, subjected to a random permutation to account for the lack of order information. Treating permutations as missing data, we derive an expectation-maximization (EM) algorithm for estimating the random walk parameters. The model and EM algorithm significantly simplify the problem, but the computational complexity of the reconstruction process does grow exponentially in the length of each transmission path. For networks with long paths, the exact e-step may be computationally intractable. We propose a polynomial-time Monte Carlo EM algorithm based on importance sampling and derive conditions that ensure convergence of the algorithm with high probability. Simulations and experiments with Internet measurements demonstrate the promise of this approach.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.976
Threshold uncertainty score0.998

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.264
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2008
Admission routes1
Has abstractyes

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