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Record W2107173891 · doi:10.1186/1471-2202-14-s1-p149

Pattern formation in a mean field model of electrocortical activity

2013· article· en· W2107173891 on OpenAlexaff
Lennaert van Veen, Kevin Green

Bibliographic record

VenueBMC Neuroscience · 2013
Typearticle
Languageen
FieldNeuroscience
TopicNeural dynamics and brain function
Canadian institutionsOntario Tech University
Fundersnot available
KeywordsPopulationComputer scienceDifferential equationBifurcationStochastic differential equationField (mathematics)Dynamical systems theoryStatistical physicsApplied mathematicsMathematicsMathematical analysisPhysicsNonlinear systemPure mathematics

Abstract

fetched live from OpenAlex

Mean field models of cortical activity describe the electrical potentials and interactions of cortical neuron populations, coarse-grained over the scale of a few macro columns. Such models can be analysed as dynamical systems, in particular as time-dependent partial differential or integro-differential equations, which may have complicating aspects such as explicit time delays and stochastic terms. We analyse a model of intermediate complexity, formulated by Liley et al. [1]. This model describes an excitatory and an inhibitory population in a simple geometry, on which the effect of long-range connections is represented by a damped wave equations. Although somewhat rudimentary from a physiological point of view, this model has been shown to predict several features of electrocortical dynamics rather well (see, e.g., [2,3] and refs therein) and is challenging to analyse mathematically. It consists of fourteen coupled partial differential equations with strong nonlinearities. Where previous analysis on this model, and similar mean-field models, has used drastic simplifications, such as reduction to zero or one spatial dimensions or a single population, we developed tools for parsing the dynamics of the full-fledged equations [4]. Using the open-source library PETSc [5], we have implemented fully implicit time-stepping for the field equations and the tangent linear model, as well as arclength continuation for equilibrium and time-periodic solutions. All computations are performed in parallel using domain decomposition. In the current application of these tools, we focus on physiologically interesting γ-range activity [3]. This activity is triggered by a Hopf bifurcation under small variations of the local inhibitory to inhibitory connection density. We computed the saddle-type periodic orbit that regulates the transient dynamics of perturbations to the base equilibrium state. Two snap shots of this orbit, computed on a 12.8 by 12.8 cm domain, with 0.5 mm resolution, are shown in Figure ​Figure1.1. The period of this orbit corresponds to a 12 Hz oscillation, whereas the final, attracting, state has a strong 40 Hz peak in the power spectrum [3]. Figure 1 Partial bifurcation diagram near the primary instability, which is a subcritical Hopf bifurcation. In ongoing work we are investigating bifurcations of this periodic orbit, which can turn completely stable or give rise to more complicated solutions, such as quasi-periodic or chaotic. This dynamical systems approach to the analysis of mean-field models should give us more insight in the complex model behaviour. Figure 2 Two snap shots of the excitatory membrane potential along the saddle periodic orbit. The potential ranges from -67 mV (dark red) to -52 mV (dark blue).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.571
Threshold uncertainty score0.317

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.052
GPT teacher head0.266
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2013
Admission routes1
Has abstractyes

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