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Record W2107871626 · doi:10.1109/tmi.2009.2033909

Retinopathy Online Challenge: Automatic Detection of Microaneurysms in Digital Color Fundus Photographs

2009· article· en· W2107871626 on OpenAlexaff
Meindert Niemeijer, Bram van Ginneken, Michael J. Cree, Atsushi Mizutani, Gwenolé Quellec, Clara I. Sá‎nchez, Bob Zhang, Roberto Hornero, Mathieu Lamard, Chisako Muramatsu, Xiangqian Wu, Guy Cazuguel, Jane You, Agustín Mayo-Íscar, Qin Li, Yuji Hatanaka, Béatrice Cochener, Christian Roux, Fakhri Karray, María García, Hiroshi Fujita, Michael D. Abràmoff

Bibliographic record

VenueIEEE Transactions on Medical Imaging · 2009
Typearticle
Languageen
FieldMedicine
TopicRetinal Imaging and Analysis
Canadian institutionsUniversity of Waterloo
FundersHong Kong GovernmentHong Kong Polytechnic UniversityNational Eye InstituteMinisterio de Ciencia e InnovaciónNederlandse Organisatie voor Wetenschappelijk OnderzoekWaikato Medical Research FoundationResearch to Prevent Blindness
KeywordsComputer scienceArtificial intelligenceFundus (uterus)Context (archaeology)Diabetic retinopathyData setTest setSoftwareSet (abstract data type)Computer visionTask (project management)MedicineOphthalmologyDiabetes mellitus

Abstract

fetched live from OpenAlex

The detection of microaneurysms in digital color fundus photographs is a critical first step in automated screening for diabetic retinopathy (DR), a common complication of diabetes. To accomplish this detection numerous methods have been published in the past but none of these was compared with each other on the same data. In this work we present the results of the first international microaneurysm detection competition, organized in the context of the Retinopathy Online Challenge (ROC), a multiyear online competition for various aspects of DR detection. For this competition, we compare the results of five different methods, produced by five different teams of researchers on the same set of data. The evaluation was performed in a uniform manner using an algorithm presented in this work. The set of data used for the competition consisted of 50 training images with available reference standard and 50 test images where the reference standard was withheld by the organizers (M. Niemeijer, B. van Ginneken, and M. D. Abràmoff). The results obtained on the test data was submitted through a website after which standardized evaluation software was used to determine the performance of each of the methods. A human expert detected microaneurysms in the test set to allow comparison with the performance of the automatic methods. The overall results show that microaneurysm detection is a challenging task for both the automatic methods as well as the human expert. There is room for improvement as the best performing system does not reach the performance of the human expert. The data associated with the ROC microaneurysm detection competition will remain publicly available and the website will continue accepting submissions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.033

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.008
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0040.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0020.002
Research integrity0.0030.001
Insufficient payload (model declined to judge)0.0020.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.276
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations516
Published2009
Admission routes1
Has abstractyes

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