MétaCan
Menu
Back to cohort
Record W2108293405 · doi:10.1186/s13717-015-0034-0

A cross-city molecular biogeographic investigation of arbuscular mycorrhizas in Conyza canadensis rhizosphere across native and non-native regions

2015· article· en· W2108293405 on OpenAlexafffund
Manzoor A. Shah, Marie-Ève Beaulieu, Zafar A. Reshi, Salman Qureshi, Damase P. Khasa

Bibliographic record

VenueEcological Processes · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsUniversité Laval
FundersForeign Affairs and International Trade CanadaCanadian Bureau for International EducationUniversity of Montana
KeywordsBiologyRhizosphereNative plantIntroduced speciesEcologySpecies diversityBotany

Abstract

fetched live from OpenAlex

The ecological processes underlying the suppressive impacts of invasive species on native species diversity, both above- and below-ground, in non-native regions are not well understood. We therefore aimed to investigate the cross-city biogeographic patterns of arbuscular mycorrhizal (AM) diversity in Conyza canadensis rhizosphere in native (North American) and non-native (Kashmir Himalayan) regions. We recovered AMF spores from rhizospheric soils of Conyza in native and non-native ranges, besides doing so from the uninvaded sites in the introduced region. DNA extracted from AMF spores was processed for cloning and PCR-RFLP of SSU rRNA gene to yield the restriction groups (RGs) followed by their sequence analysis to determine the sequence groups (SGs). The results indicated greater diversity of RGs and SGs in Conyza rhizosphere in native than in non-native sites. In the introduced region, however, the AMF diversity was more in uninvaded than in invaded sites. The species composition of AMF varied significantly between native and non-native regions and so also between invaded and uninvaded habitats. Though difference in AMF diversity between Conyza invaded and uninvaded sites may be attributed to invasion, the role of other evolutionary factors seems likely for differences between the native and non-native regions. We suggest that the ecological processes underlying these evolutionary differences in two biogeographic regions, besides the intensity of urbanization, might play some role in these differences.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.258
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2015
Admission routes2
Has abstractyes

Explore more

Same venueEcological ProcessesSame topicMycorrhizal Fungi and Plant InteractionsFrench-language works237,207