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Record W2108460578 · doi:10.1017/s001667230900007x

Breeding without breeding

2009· article· en· W2108460578 on OpenAlexafffund
Yousry A. El‐Kassaby, Milan Lstibůrek

Bibliographic record

VenueGenetics Research · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversity of British Columbia
FundersNárodní Agentura pro Zemědělský VýzkumNatural Sciences and Engineering Research Council of CanadaGrantová Agentura České Republiky
KeywordsSelection (genetic algorithm)Tree breedingBiologyProgeny testingMating designGenetic gainMatingBiotechnologyPlant breedingHybridEvolutionary biologyGenetic variationGeneticsEcologyComputer scienceAgronomyHeterosisMachine learning

Abstract

fetched live from OpenAlex

An innovative approach to tree breeding called 'breeding without breeding' (BWB) is presented. The method, as applied on the material in hand, allows the capture of 75-85% of the genetic response to selection attained through conventional programmes without the need to do any controlled pollination and simplified or possibly no experimental field testing: both considered to be the most resource-demanding activities in breeding programmes. BWB combines the use of genotypic or phenotypic pre-selection of superior individuals, informative DNA markers for fingerprinting and pedigree reconstruction of offspring to assemble naturally created full- and half-sib families resulting from mating among selected parents, and quantitative genetics analyses to identify elite genotypes for further genetic improvement or the establishment of production populations. BWB utility is demonstrated using a retrospective study of Douglas-fir (Pseudotsuga menziesii) progeny tests consisting of offspring produced from 150 controlled crosses among 60 parents and established over three sites. The empirical results are supported by theoretical expectations demonstrating anticipated minimum genetic response compared with conventional approaches. The method's simplicity offers an exceptional opportunity for the development of comparable breeding efforts in developing countries, advanced and new breeding programmes, and economically important and 'minor' species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.508
Threshold uncertainty score0.671

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.074
GPT teacher head0.374
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations135
Published2009
Admission routes2
Has abstractyes

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