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Record W2110006131

The effects of naturally-derived plant compounds on pseudomonas aeruginosa pathogenicity

2014· dissertation· en· W2110006131 on OpenAlexaff
Karina Kachur

Bibliographic record

VenueKnowledge Commons (Lakehead University) · 2014
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGinseng Biological Effects and Applications
Canadian institutionsLakehead University
Fundersnot available
KeywordsPseudomonas aeruginosaPathogenicityBiologyMicrobiologyGeneticsBacteria
DOInot available

Abstract

fetched live from OpenAlex

Pseudomonas aeruginosa has risen as one of the most resistant bacterial pathogens affecting people worldwide. Inefficacy of current antimicrobial treatments to relieve P. aeruginosa infections demands the need for novel antimicrobial therapies. Natural products such as the aqueous and alcoholic extracts of North American ginseng, as well as thymol and carvacrol, compounds purified from thyme and oregano, have previously displayed antibacterial properties against P. aeruginosa. In this study we examined the effect of these compounds on P. aeruginosa pathogenicity by measuring pathogenic markers (ie virulence factor secretion, biofilm formation) after PAO1 and Cystic Fibrosis clinical isolates were treated with the natural compounds. Thymol and carvacrol were able to attenuate the growth of P. aeruginosa clinical isolates in nutrient and minimal media however PAO1growth was only attenuated in the nutrient media. The alcoholic ginseng extract displayed no growth inhibitory action towards any strain tested; however
\nthe aqueous ginseng extract attenuated growth of all strains at concentrations of 8.0-7.0% w/v and 3.0-2.0% w/v in the minimal and nutrient media respectively. Sub-inhibitory concentrations of the aqueous ginseng extract increased growth rate and bacterial adherence, but decreased the production of many virulence factors, while the alcoholic ginseng treatment increases secretion of select virulence factors. Microarray analysis revealed decreases in virulence factors with sub-inhibitory aqueous ginseng extract exposure. Treatment with sub-inhibitory concentrations of thymol or carvacrol reduced pigment, lipase, and protease secretion after exposure to thymol or carvacrol in a strain specific manner; however bacterial motility was negatively affected in all strains with treatment of either compound. Microarray the thymol 6 h and carvacrol 24 h treatments displayed enhanced expression of pyoverdine and pyochelin synthesis genes. Enrichment of the ribosomal pathway was substantial after the 24 h carvacrol and aqueous extract exposures, findings which require further investigation. Overall reduction in pathogenesis was most evident with the aqueous ginseng extract however thymol and carvacrol were most effective at inhibiting bacterial growth. Further chemical analysis of the alcoholic and aqueous ginseng extracts may reveal specific extract constituents with potent antibacterial properties. Analysis of potential synergy between the tested plant components and current antibiotics of P. aeruginosa may provide a greater appreciation for their use in antibacterial therapies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.700
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.228
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

Explore more

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