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Record W2112470507 · doi:10.1139/b10-087

Genetic monitoring in natural perennial plant populations

2011· article· en· W2112470507 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueBotany · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyOutcrossingGenetic monitoringGenetic driftPopulationEcologyConservation geneticsInbreedingOutbreeding depressionGenetic diversityPopulation geneticsGenetic variationEvolutionary biologyAlleleGeneticsMicrosatelliteDemographyGene

Abstract

fetched live from OpenAlex

Genetic monitoring, the quantification of temporal changes in population genetics and dynamics metrics generated by using appropriate parameters, constitutes a method with a prognostic value. Genetic monitoring has been recognized in several international agreements and documents, and can be an important tool for the protection of biodiversity. However, approaches developed so far for perennial plant species are rather cumbersome for practical use. It is proposed that perennial plant genetic monitoring should focus on keystone species of biological and economical importance, as well as rare or endangered species. In addition, genetic monitoring should concentrate on gene conservation units of such species, to be advanced in a dynamic gene conservation scheme. Three indicators are proposed for genetic monitoring based on a gene-ecological approach: natural selection, genetic drift, and a gene flow-mating system. These are evaluated based on three demographic (age and size class distribution, reproductive fitness, regeneration abundance) and four genetic (effective population size, allelic richness, latent genetic potential, outcrossing/actual inbreeding rate) parameters. Minimum sample sizes, critical levels of differences among parameters, and costs for temporal evaluation are proposed. The benefits of the immediate application of genetic monitoring are highlighted.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.055
Threshold uncertainty score0.323

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.245
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it