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Record W2112683927 · doi:10.1177/2049936114522996

A novel genetic modifier for clarithromycin-related cardiac arrhythmia risk?

2014· article· en· W2112683927 on OpenAlex
Jules C. Hancox, Chunyun Du, Aziza El Harchi, Adrián Baranchuk, Henggui Zhang

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueTherapeutic Advances in Infectious Disease · 2014
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsKingston General HospitalQueen's University
Fundersnot available
KeywordsClarithromycinCardiac arrhythmiaInternal medicineCardiologyMedicineAtrial fibrillation

Abstract

fetched live from OpenAlex

A number of drugs in clinical use, including some antimicrobial agents, are associated with prolongation of the QT interval and the associated ventricular arrhythmia torsades de pointes (TdP) [Vandenberg et al. 2001; Yap and Camm, 2003; Bril et al. 2010]. Although typically the incidence of TdP with particular drugs is low, the potential hazard is high as TdP either (usually) spontaneously resolves into sinus rhythm or degenerates into potentially fatal ventricular fibrillation. Consequently, to maximize safety in both drug development and in the use of existing drugs, it is important to establish factors that may exacerbate QT-interval prolongation and liability towards TdP with drugs. Some macrolide antibiotics have been associated with TdP [Bril et al. 2010; Shaffer et al. 2002]. Clarithromycin is one such drug [e.g. Gysel et al. 2013; Vieweg et al. 2013]. A recent paper in this journal reported major risk factors from the evaluation of 21 case reports of TdP associated with clarithromycin use [Vieweg et al. 2013]. These included female sex (the majority of identified cases were in women), old age and the presence of heart disease [Vieweg et al. 2013]. Some patients received other QT interval-prolonging drugs and/or presented with hypokalaemia, and three patients had evidence of congenital long QT syndrome [Vieweg et al. 2013]. These factors are concordant with known risk factors for drug-induced QT prolongation and TdP [Vandenberg et al. 2001; Yap and Camm, 2003; Bril et al. 2010]. In this letter, we wish to highlight a potential novel modifier of QT prolongation with clarithromycin, on the basis of a recent in vitro investigation of the drug’s actions [Du et al. 2013]. Most drugs associated with QT-interval prolongation and TdP share a common action of pharmacological inhibition of the cardiac rapid delayed rectifier potassium current (IKr), which plays an important role in regulating ventricular electrical repolarization [Vandenberg et al. 2001; Yap and Camm, 2003; Hancox et al. 2008]. The pore-forming subunit of IKr channels is encoded by the human ether-a-go-go related gene (hERG) and recombinant hERG channels are widely used to evaluate the propensity of drugs to inhibit IKr [Vandenberg et al. 2001; Yap and Camm, 2003; Hancox et al. 2008]. Clarithromycin is known to produce pharmacological inhibition of hERG [Vieweg et al. 2013]. In addition, the potency of clarithromycin inhibition of hERG has been shown to be enhanced by a mutation to the KCNE2 gene found in a patient with clarithromycin-induced QT prolongation and TdP [Abbott et al. 1999]. The KCNE2 protein can complex with hERG and is a putative molecular partner for hERG in forming IKr channels [Abbott et al. 1999]. The Q9E KCNE2 mutation increases the potency of clarithromycin’s action on hERG [Abbott et al. 1999], thereby exacerbating delayed ventricular repolarization with the drug. We have investigated whether a related protein, KCNE1, can modify hERG pharmacology and our results in respect of clarithromycin suggest that it can [Du et al. 2013]. KCNE1 is a small transmembrane protein most well known as a molecular partner of KCNQ1 to form ‘IKs’ potassium channels in the heart, with loss-of-function KCNE1 mutations responsible for the LQT5 form of congenital long QT syndrome [Modell and Lehmann, 2006]. However, KCNE1 appears also able to complex with hERG and thereby has potential to influence IKr [McDonald et al. 1997; Du et al. 2013]. We investigated the effects of two KCNE1 mutations (A8V and D76N, respectively in the N and C termini) and one polymorphism (D85N in the C terminus) on the sensitivity of the hERG current to pharmacological blockade [Du et al. 2013]. Clarithromycin sensitivity of hERG was measured through patch-clamp recordings from hERG co-expressed with wild-type or variant KCNE1 in human embryonic kidney (HEK293) cells [Du et al. 2013]. The half-maximal inhibitory concentration (IC50) for hERG current inhibition with A8V KCNE1 co-expression was raised nearly two-fold compared with that of wild-type KCNE1 (80.26 ± 9.20 µM versus 40.85 ± 4.39 µM, respectively), whilst both D76N and D85N KCNE1 showed lower IC50 values (14.81 ± 6.76 µM and 27.48 ± 6.77 µM, respectively) [Du et al. 2013]. Thus, two KCNE1 variants conferred increased sensitivity to clarithromycin upon hERG, whilst one resulted in decreased sensitivity to the drug [Du et al. 2013]. The significance of these findings is that it is possible that individual variation in KCNE1 could feasibly influence cardiac sensitivity to clarithromycin through influencing sensitivity of IKr/hERG to pharmacological blockade (additional to any effect of KCNE1 variation on the IKs channel, which itself may influence net available repolarizing potassium current). A recent candidate gene survey found the D85N KCNE1 polymorphism in 8.6% of drug-induced long QT syndrome cases, compared with less than 2% of controls [Kaab et al. 2012], with other smaller studies also providing evidence of an association [Paulussen et al. 2004; Lin et al. 2012]. This association underscores the potential value of genetic screening in drug-induced long QT syndrome/TdP, whilst our recent data on clarithromycin highlight a potential new mechanism for individual variation in clarithromycin sensitivity [Du et al. 2013].

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.830
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.269
Teacher spread0.262 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it