A novel genetic modifier for clarithromycin-related cardiac arrhythmia risk?
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Bibliographic record
Abstract
A number of drugs in clinical use, including some antimicrobial agents, are associated with prolongation of the QT interval and the associated ventricular arrhythmia torsades de pointes (TdP) [Vandenberg et al. 2001; Yap and Camm, 2003; Bril et al. 2010]. Although typically the incidence of TdP with particular drugs is low, the potential hazard is high as TdP either (usually) spontaneously resolves into sinus rhythm or degenerates into potentially fatal ventricular fibrillation. Consequently, to maximize safety in both drug development and in the use of existing drugs, it is important to establish factors that may exacerbate QT-interval prolongation and liability towards TdP with drugs. Some macrolide antibiotics have been associated with TdP [Bril et al. 2010; Shaffer et al. 2002]. Clarithromycin is one such drug [e.g. Gysel et al. 2013; Vieweg et al. 2013]. A recent paper in this journal reported major risk factors from the evaluation of 21 case reports of TdP associated with clarithromycin use [Vieweg et al. 2013]. These included female sex (the majority of identified cases were in women), old age and the presence of heart disease [Vieweg et al. 2013]. Some patients received other QT interval-prolonging drugs and/or presented with hypokalaemia, and three patients had evidence of congenital long QT syndrome [Vieweg et al. 2013]. These factors are concordant with known risk factors for drug-induced QT prolongation and TdP [Vandenberg et al. 2001; Yap and Camm, 2003; Bril et al. 2010]. In this letter, we wish to highlight a potential novel modifier of QT prolongation with clarithromycin, on the basis of a recent in vitro investigation of the drug’s actions [Du et al. 2013]. Most drugs associated with QT-interval prolongation and TdP share a common action of pharmacological inhibition of the cardiac rapid delayed rectifier potassium current (IKr), which plays an important role in regulating ventricular electrical repolarization [Vandenberg et al. 2001; Yap and Camm, 2003; Hancox et al. 2008]. The pore-forming subunit of IKr channels is encoded by the human ether-a-go-go related gene (hERG) and recombinant hERG channels are widely used to evaluate the propensity of drugs to inhibit IKr [Vandenberg et al. 2001; Yap and Camm, 2003; Hancox et al. 2008]. Clarithromycin is known to produce pharmacological inhibition of hERG [Vieweg et al. 2013]. In addition, the potency of clarithromycin inhibition of hERG has been shown to be enhanced by a mutation to the KCNE2 gene found in a patient with clarithromycin-induced QT prolongation and TdP [Abbott et al. 1999]. The KCNE2 protein can complex with hERG and is a putative molecular partner for hERG in forming IKr channels [Abbott et al. 1999]. The Q9E KCNE2 mutation increases the potency of clarithromycin’s action on hERG [Abbott et al. 1999], thereby exacerbating delayed ventricular repolarization with the drug. We have investigated whether a related protein, KCNE1, can modify hERG pharmacology and our results in respect of clarithromycin suggest that it can [Du et al. 2013]. KCNE1 is a small transmembrane protein most well known as a molecular partner of KCNQ1 to form ‘IKs’ potassium channels in the heart, with loss-of-function KCNE1 mutations responsible for the LQT5 form of congenital long QT syndrome [Modell and Lehmann, 2006]. However, KCNE1 appears also able to complex with hERG and thereby has potential to influence IKr [McDonald et al. 1997; Du et al. 2013]. We investigated the effects of two KCNE1 mutations (A8V and D76N, respectively in the N and C termini) and one polymorphism (D85N in the C terminus) on the sensitivity of the hERG current to pharmacological blockade [Du et al. 2013]. Clarithromycin sensitivity of hERG was measured through patch-clamp recordings from hERG co-expressed with wild-type or variant KCNE1 in human embryonic kidney (HEK293) cells [Du et al. 2013]. The half-maximal inhibitory concentration (IC50) for hERG current inhibition with A8V KCNE1 co-expression was raised nearly two-fold compared with that of wild-type KCNE1 (80.26 ± 9.20 µM versus 40.85 ± 4.39 µM, respectively), whilst both D76N and D85N KCNE1 showed lower IC50 values (14.81 ± 6.76 µM and 27.48 ± 6.77 µM, respectively) [Du et al. 2013]. Thus, two KCNE1 variants conferred increased sensitivity to clarithromycin upon hERG, whilst one resulted in decreased sensitivity to the drug [Du et al. 2013]. The significance of these findings is that it is possible that individual variation in KCNE1 could feasibly influence cardiac sensitivity to clarithromycin through influencing sensitivity of IKr/hERG to pharmacological blockade (additional to any effect of KCNE1 variation on the IKs channel, which itself may influence net available repolarizing potassium current). A recent candidate gene survey found the D85N KCNE1 polymorphism in 8.6% of drug-induced long QT syndrome cases, compared with less than 2% of controls [Kaab et al. 2012], with other smaller studies also providing evidence of an association [Paulussen et al. 2004; Lin et al. 2012]. This association underscores the potential value of genetic screening in drug-induced long QT syndrome/TdP, whilst our recent data on clarithromycin highlight a potential new mechanism for individual variation in clarithromycin sensitivity [Du et al. 2013].
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it