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A framework for estimating niche metrics using the resemblance between qualitative resources

2011· article· en· W2112837855 on OpenAlexafffund
Miquel De Cáceres, Daniel Sol, Oriol Lapiedra, Pierre Legendre

Bibliographic record

VenueOikos · 2011
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant and animal studies
Canadian institutionsUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsNicheToolboxResource (disambiguation)Ecological nicheNiche differentiationEcologyBootstrapping (finance)Environmental niche modellingSet (abstract data type)Resource distributionNiche segregationComputer scienceHabitatBiologyEconometricsMathematicsResource allocation

Abstract

fetched live from OpenAlex

Despite the central importance of the niche concept for the ecological theory, current methods to quantify the species niche from qualitative resources, such as food or habitat types, remain insufficiently developed. Classically, information theory and diversity measures have formed the toolbox used for calculating resource niche metrics on species preference data for a set of qualitative resources. We provide a comprehensive framework that extends these classical approaches by incorporating the resemblance between resources into the calculation of resource niche metrics. This does not only allow estimation of the niche centre, breadth, overlap and displacement with greater accuracy, but also makes the estimates less influenced by the way the resources are subdivided. In addition, all niche metrics can be calculated while taking into account the variation in resource availability, and confidence intervals can be obtained by bootstrapping. We illustrate the utility of the framework with an analysis of dietary preferences in feral pigeons Columba livia .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.325
Threshold uncertainty score0.345

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.388
GPT teacher head0.369
Teacher spread0.019 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations93
Published2011
Admission routes2
Has abstractyes

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