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Record W2114262826 · doi:10.1158/1055-9965.epi-14-1062

Development and Validation of a Melanoma Risk Score Based on Pooled Data from 16 Case–Control Studies

2015· article· en· W2114262826 on OpenAlexaff
John R. Davies, Yu‐Mei Chang, D. Timothy Bishop, Bruce K. Armstrong, Véronique Bataille, Wilma Bergman, Marianne Berwick, Paige M. Bracci, Mark Elwood, Marc S. Ernstoff, Adèle C. Green, Nelleke A. Gruis, Elizabeth A. Holly, Christian Ingvar, Peter A. Kanetsky, Margaret R. Karagas, Tim K. Lee, Loı̈c Le Marchand, Rona M. MacKie, Håkan Olsson, Anne Østerlind, Timothy R. Rebbeck, Kristian Reich, Peter Sasieni, Victor Siskind, Anthony J. Swerdlow, Linda Titus, Michael S. Zens, Andreas Ziegler, Richard P. Gallagher, Jennifer H. Barrett, Julia Newton‐Bishop

Bibliographic record

VenueCancer Epidemiology Biomarkers & Prevention · 2015
Typearticle
Languageen
FieldMedicine
TopicCutaneous Melanoma Detection and Management
Canadian institutionsCanadian Centre for Applied Research in Cancer ControlBC Cancer Agency
FundersNational Cancer InstituteMedical Research CouncilCancer Research UK
KeywordsMedicineConfidence intervalOdds ratioImputation (statistics)Logistic regressionStatisticsMissing dataReceiver operating characteristicFamily historyOddsSunburnRisk assessmentDemographyInternal medicineComputer scienceMathematicsDermatology

Abstract

fetched live from OpenAlex

BACKGROUND: We report the development of a cutaneous melanoma risk algorithm based upon seven factors; hair color, skin type, family history, freckling, nevus count, number of large nevi, and history of sunburn, intended to form the basis of a self-assessment Web tool for the general public. METHODS: Predicted odds of melanoma were estimated by analyzing a pooled dataset from 16 case-control studies using logistic random coefficients models. Risk categories were defined based on the distribution of the predicted odds in the controls from these studies. Imputation was used to estimate missing data in the pooled datasets. The 30th, 60th, and 90th centiles were used to distribute individuals into four risk groups for their age, sex, and geographic location. Cross-validation was used to test the robustness of the thresholds for each group by leaving out each study one by one. Performance of the model was assessed in an independent UK case-control study dataset. RESULTS: Cross-validation confirmed the robustness of the threshold estimates. Cases and controls were well discriminated in the independent dataset [area under the curve, 0.75; 95% confidence interval (CI), 0.73-0.78]. Twenty-nine percent of cases were in the highest risk group compared with 7% of controls, and 43% of controls were in the lowest risk group compared with 13% of cases. CONCLUSION: We have identified a composite score representing an estimate of relative risk and successfully validated this score in an independent dataset. IMPACT: This score may be a useful tool to inform members of the public about their melanoma risk.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.370
Threshold uncertainty score0.617

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.164
GPT teacher head0.387
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueCancer Epidemiology Biomarkers & PreventionSame topicCutaneous Melanoma Detection and ManagementFrench-language works237,207