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Record W2114404499 · doi:10.1890/12-1795.1

Estimating extinction from species–area relationships: why the numbers do not add up

2013· article· en· W2114404499 on OpenAlexaff
Fangliang He, Stephen P. Hubbell

Bibliographic record

VenueEcology · 2013
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsExtinction (optical mineralogy)Sampling (signal processing)HabitatArtifact (error)EcologyRare speciesMathematicsStatisticsRemote sensingComputer sciencePaleontologyGeologyBiologyArtificial intelligence

Abstract

fetched live from OpenAlex

Researchers commonly use species-area relationships (SAR) to estimate extinction rates caused by habitat loss by reversing the SAR, extrapolating backward from area to calculate expected species loss. We have previously shown that the backward SAR method considerably overestimates extinction rates due to a previously unrecognized sampling artifact. Jacob Bock Axelsen, Uri Roll, Lewi Stone, and Andrew Solow recently argued that the backward SAR method is correct and the method does not overestimate extinction rates. In this paper, we further elaborate and clarify our previous results. We show that the backward SAR method gives the correct extinction rate only under a strict complementary-area sampling design, which is not used in practice because it requires knowing which species are endemic to the area of destroyed habitat, or the number of species in the complementary area. Because of this problem, researchers substitute a power-law model for the SAR in the backward SAR equation. However, this substitution violates the backward SAR method's requirement for complementary sampling. With this model substitution, the backward SAR equation is no longer correct, except in the special case of randomly distributed species. For the complementary sampling or random distribution of species, the first individual of a species to be encountered and the last individual to be encountered to lose the species are exchangeable (or the same individual). But this is not the case for other sampling designs or if species are not randomly distributed and explains why the backward SAR method fails to correctly estimate extinction rates. Our proofs and results are general and explain the widely recognized overestimation of extinction by the backward SAR method. We suggest future directions for developing general theory for estimating species extinction from species-area relationships. Until then, however, the backward SAR method should not be used to estimate species extinction in practice.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score0.996

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0260.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.231
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations64
Published2013
Admission routes1
Has abstractyes

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