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Record W2114716110 · doi:10.4172/2161-0703.1000140

Fecal specimens for Clostridium difficile Diagnostic Testing are Stable for up to 72 hours at 4°C

2014· article· en· W2114716110 on OpenAlexafffund
Michelle J Alfa Nancy Olson

Bibliographic record

VenueJournal of Medical Microbiology & Diagnosis · 2014
Typearticle
Languageen
FieldMedicine
TopicClostridium difficile and Clostridium perfringens research
Canadian institutionsSt. Boniface Hospital
FundersDiagnostic Services Manitoba
KeywordsClostridium difficileC difficileClostridium InfectionsMicrobiologyFecesClostridiumMedicineBiologyBacteriaAntibiotics

Abstract

fetched live from OpenAlex

Background: Clostridium difficile testing for stool specimens transported from remote geographic locations is a challenge due to long transit times that are often at room temperature.The impact of storage at room temperature versus 4 ° C on Clostridium difficile diagnostic tests during transport of stool samples has not been well studied Methods: This study assessed the impact of storage at room temperature versus 4°C for up to 72 hours on the stability of glutamate dehydrogenase antigen, Toxin A and B antigens, toxigenic culture and cytopathic effect testing.Twelve diagnostic stool samples that were tested on the day of collection and shown to be C. difficile toxin positive were used for this study.Sample aliquots of each stool were stored at room temperature and 4 ° C and testing was repeated at 24, 48 and 72 hours.Results: The glutamate dehyrdogenase antigen and toxigenic stool culture tests were shown to be 100% reproducible at room temperature and 4 ° C for up to 72 hours.Toxin A and B antigen deteriorated to 70% by 72 hours at room temperature but was 90% reproducible if held at 4 ° C. The cytopathic effect assay was 90% reproducible by 72 hours at room temperature and 4 ° C. Conclusions:Based on our data we recommend that for laboratories receiving stool samples from remote regions where transit may be prolonged that glutamate dehydrogenase antigen screening followed by nucleic acid amplification testing may be a feasible diagnostic algorithm.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.326
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2014
Admission routes2
Has abstractyes

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