Solid-state nuclear magnetic resonance (NMR) spectroscopy reveals distinctive protein dynamics in closely related spider silks
Bibliographic record
Abstract
Structurally closely related spider silks, namely, major ampullate silk (MaS) reeled at 0.5 and 10 cm/s, minor ampullate silk (MiS), and cocoon silk have been investigated by solid-state nuclear magnetic resonance (NMR). These silks exhibit different mechanical properties that are not well explained with current structural data. NMR spectra confirm that the secondary structures of these silks are similar, but that differing relaxation dynamics exist at the alanine, glycine, and glutamine residue level. MaS reeled rapidly is made of more mobile proteins in both the β-sheet and amorphous regions, suggesting that reeling speed alters molecular rearrangement during spinning, with the chain packing being less organized in the fastpull fiber. Alanine and glycine relaxation dynamics increases as MaS < MiS < cocoon silk, showing that the whole fiber displays distinctive protein dynamics, chain packing, and intermolecular interactions. Besides molecular orientation, silk extensibility is related to a more mobile structural organization.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.002 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".