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Record W2118468355 · doi:10.4319/lo.2008.53.3.0922

Water masses and biogeography of picoeukaryote assemblages in a cold hydrographically complex system

2008· article· en· W2118468355 on OpenAlexafffund
Andrew K. Hamilton, Connie Lovejoy, Pierre E. Galand, R. Grant Ingram

Bibliographic record

VenueLimnology and Oceanography · 2008
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversité LavalUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of CanadaArcticNet
KeywordsWater massSpecies richnessAbiotic componentPhytoplanktonArcticEcologyBiologyOceanographyDominance (genetics)Community structureBiogeographyWater columnEnvironmental scienceGeology

Abstract

fetched live from OpenAlex

We investigated the influence of geographic distance, environmental variables, and water mass origin on picoeukaryote (phytoplankton and other protists <3 µm) assemblages to assess the presence of biogeographic patterns. The study region was an area of converging Arctic and Atlantic currents where several distinct water masses were overlain and intersecting. Denaturing gradient gel electrophoresis (DGGE) profiles of assemblages revealed 42 distinct band types overall, with minimum richness (8 band types) in Arctic surface water and Atlantic deep water, and maximum richness (22 band types) in regions of water mass mixing. Sequencing of DGGE bands revealed that most sequences (78 of 98) matched uncultured clones from major taxonomic marine groups, including the Acantharea, Bacillariophyceae, Cercozoa, Chrysophyceae, Dinophyceae, Prasinophyceae, Prymnesiophyceae, and stramenopiles, as well as the novel marine stramenopiles (MAST), alveolate groups I and II, and picobiliphytes. Multivariate statistical analysis of DGGE profiles revealed that picoeukaryote assemblage composition was positively correlated with geographic proximity, abiotic environmental conditions (salinity, photosynthetically active radiation, and transmissivity), and biotic community structure (total phototrophic biomass and size class). Picoeukaryote assemblage similarity was also strongly associated with water mass origin; assemblages in close spatial proximity (horizontally or vertically) showed less similarity if located in different water masses, while spatially distant assemblages showed higher similarity if located within the same water mass. This study highlights that ocean hydrodynamics must be considered to fully explain the distribution and diversity of microbes in this fluid realm.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.045
Threshold uncertainty score0.756

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.002
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.195
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations90
Published2008
Admission routes2
Has abstractyes

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