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Biodegradation of polychlorinated biphenyls in Aroclor 1232 and production of metabolites from 2,4,4'-trichlorobiphenyl at low temperature by psychrotolerant Hydrogenophaga sp. strain IA3-A

2007· article· en· W2120422095 on OpenAlexaff
Adewale J. Lambo, T.R. Patel

Bibliographic record

VenueJournal of Applied Microbiology · 2007
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial bioremediation and biosurfactants
Canadian institutionsMemorial University of Newfoundland
FundersAgilent Technologies
KeywordsBiodegradationBiphenylChemistryMetabolismDegradation (telecommunications)Polychlorinated biphenylStrain (injury)BiotransformationEnvironmental chemistryBacteriaBioremediationChromatographyMetabolic pathwayGas chromatographyBiochemistryOrganic chemistryEnzymeBiology

Abstract

fetched live from OpenAlex

AIMS: To determine the extent and pattern of degradation of polychlorinated biphenyls (PCBs) in Aroclor 1232 at 5 degrees C by a psychrotolerant bacterium, and to confirm the formation of intermediates of PCB metabolism at low temperature using 2,4,4'-trichlorobiphenyl (2,4,4'-TCB). METHODS AND RESULTS: 10 ppm of Aroclor 1232 or 100 micromol l(-1) 2,4,4'-TCB was incubated with biphenyl-grown cells at 5 degrees C or 30 degrees C for 48 or 72 h. Degradation of PCBs and the products of metabolism of 2,4,4'-TCB were confirmed by gas chromatography and mass spectrometry. Extents of degradation of many of the PCBs were similar at 5 degrees C and 30 degrees C. The extent of biodegradation of PCBs in Aroclor 1232 at 5 degrees C was dependent on chlorination pattern. The 14 chlorine-containing intermediates of 2,4,4'-TCB metabolism, which were detected, include several isomers of dihydrodiols, dihydroxy compounds and meta-cleavage compounds. CONCLUSIONS: The bacterium will be useful for bioremediation of PCB-contaminated sites in cold climates; however, knowledge of the products of PCB metabolism is necessary, as they could be more toxic than the parent compounds. SIGNIFICANCE AND IMPACT OF THE STUDY: Substantial degradation of some PCBs in Aroclor 1232 was demonstrated at low temperature within 48 h. The detection of several isomeric intermediates suggests that multiple pathways are used to transform PCBs in this strain. For the first time, formation of metabolic products from 2,4,4'-TCB at low temperature is confirmed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.627

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.197
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2007
Admission routes1
Has abstractyes

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