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Record W2124121931 · doi:10.1002/adsc.201500349

Recent Developments in Enzymatic Synthesis of Modified Sialic Acid Derivatives

2015· article· en· W2124121931 on OpenAlexafffund
Ching‐Ching Yu, Stephen G. Withers

Bibliographic record

VenueAdvanced Synthesis & Catalysis · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlycosylation and Glycoproteins Research
Canadian institutionsUniversity of British Columbia
FundersCanadian Institutes of Health ResearchKillam TrustsNatural Sciences and Engineering Research Council of CanadaMinistry of Science and Technology, TaiwanCanada Research Chairs
KeywordsSialic acidChemistrySialidaseEnzymeGlycanSubstrate (aquarium)BiochemistryBiocatalysisSubstrate specificityComputational biologyNeuraminidaseGlycoproteinCatalysisBiologyReaction mechanism

Abstract

fetched live from OpenAlex

Abstract Sialic acid‐containing glycans play important roles in biology, but their synthesis by standard chemical approaches is challenging. Enzymatic assembly is generally a better approach. In the last two decades, a number of bacterial sialyltransferases (STs) and trans‐sialidases have been identified and a number of them found to exhibit broad substrate specificity. In this review, we will focus on the donor and acceptor substrate specificities of these enzymes along with the enzymatic routes employed to prepare sialosides bearing modifications at specific positions on the sialic acid carbon skeleton. Understanding the substrate tolerance of these enzymes will help researchers to choose the best biocatalyst for the assembly of specific sialosides, which can be valuable tools in the study of or inhibition of sialidases and STs and sialic acid‐binding proteins. In addition, the ability to study these processes using synthetic sialylated glycans will lead to a greater understanding of their biology and will lead to new therapeutic targets. magnified image

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.297
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations42
Published2015
Admission routes2
Has abstractyes

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