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FLUORESCENCE‐BASED MAXIMAL QUANTUM YIELD FOR PSII AS A DIAGNOSTIC OF NUTRIENT STRESS

2001· article· en· W2128691780 on OpenAlexaff
Jean-Paul. Parkhill, Gary Maillet, John J. Cullen

Bibliographic record

VenueJournal of Phycology · 2001
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsFisheries and Oceans CanadaDalhousie University
Fundersnot available
KeywordsFluorometerThalassiosira pseudonanaPhotosynthesisNutrientQuantum yieldDCMUBiologyFluorescenceChlorophyll fluorescencePhytoplanktonPhotoinhibitionPhotosystem IIIrradianceBotanyEcologyPhysicsOptics

Abstract

fetched live from OpenAlex

In biological oceanography, it has been widely accepted that the maximum quantum yield of photosynthesis is influenced by nutrient stress. A closely related parameter, the maximum quantum yield for stable charge separation of PSII, (φ PSII ) m , can be estimated by measuring the increase in fluorescence yield from dark‐adapted minimal fluorescence (F o ) to maximal fluorescence (F m ) associated with the closing of photosynthetic reaction centers with saturating light or with a photosynthetic inhibitor such as 3′‐(3,4‐dichlorophenyl)‐1′,1′‐dimethyl urea (DCMU). The ratio F v /F m (= (F m − F o )/F m ) is thus used as a diagnostic of nutrient stress. Published results indicate that F v /F m is depressed for nutrient‐stressed phytoplankton, both during nutrient starvation (unbalanced growth) and acclimated nutrient limitation (steady‐state or balanced growth). In contrast to published results, fluorescence measurements from our laboratory indicate that F v /F m is high and insensitive to nutrient limitation for cultures in steady state under a wide range of relative growth rates and irradiance levels. This discrepancy between results could be attributed to differences in measurement systems or to differences in growth conditions. To resolve the uncertainty about F v /F m as a diagnostic of nutrient stress, we grew the neritic diatom Thalassiosira pseudonana (Hustedt) Hasle et Heimdal under nutrient‐replete and nutrient‐stressed conditions, using replicate semicontinuous, batch, and continuous cultures. F v /F m was determined using a conventional fluorometer and DCMU and with a pulse amplitude modulated (PAM) fluorometer. Reduction of excitation irradiance in the conventional fluorometer eliminated overestimation of F o in the DCMU methodology for cultures grown at lower light levels, and for a large range of growth conditions there was a strong correlation between the measurements of F v /F m with DCMU and PAM ( r 2 = 0.77, n = 460). Consistent with the literature, nutrient‐replete cultures showed consistently high F v /F m (∼0.65), independent of growth irradiance. Under nutrient‐starved (batch culture and perturbed steady state) conditions, F v /F m was significantly correlated to time without the limiting nutrient and to nutrient‐limited growth rate before starvation. In contrast to published results, our continuous culture experiments showed that F v /F m was not a good measure of nutrient limitation under balanced growth conditions and remained constant (∼0.65) and independent of nutrient‐limited growth rate under different irradiance levels. Because variable fluorescence can only be used as a diagnostic for nutrient‐starved unbalanced growth conditions, a robust measure of nutrient stressed oceanic waters is still required.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.241
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations490
Published2001
Admission routes1
Has abstractyes

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