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ECOLOGICAL GENOMICS OF MODEL EUKARYOTES<sup>1</sup>

2008· article· en· W2128731094 on OpenAlexaff
John McKay, John R. Stinchcombe

Bibliographic record

VenueEvolution · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsBiologyGenomicsEvolutionary biologyEcologyGenomeComputational biologyGeneticsGene

Abstract

fetched live from OpenAlex

It is of basic importance to understand the hereditary mechanisms that function in the perpetuation of the existing natural races and species and in the evolution of new ones, but investigations in this field are difficult and have largely been neglected. The commonly used laboratory organisms are inadequate to resolve differences that characterize natural biological entities found in the wild" -Clausen and Clausen and Hiesey (1958) outlined three major areas in which data were needed: (1) genetic analysis of the traits involved in local adaptation, (2) understanding acclimation, or the plasticity of traits and gene expression across ecologically relevant conditions, and (3) understanding the pathways that underlie such acclimation and adaptation. Much has changed in the past 50 years since their seminal work. First and foremost, the work of Clausen, Keck, and Hiesey (1940, 1948) has inspired a tremendous amount of effort in the fields of ecological genetics and evolutionary ecology to study ecologically important traits with statistical methods that describe population-level patterns of genetic and phenotypic variance. Such quantitative genetic approaches can provide many basic answers, including predictions of the evolution of traits, 1

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.663
Threshold uncertainty score0.268

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.219
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2008
Admission routes1
Has abstractyes

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