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Sickle Cell Disease as a Multi‐Factorial Condition

2017· other· en· W2131881507 on OpenAlexaff
Martin H. Steinberg, Madeleine Verhovsek

Bibliographic record

VenueEncyclopedia of Life Sciences · 2017
Typeother
Languageen
FieldMedicine
TopicHemoglobinopathies and Related Disorders
Canadian institutionsMcMaster University
Fundersnot available
KeywordsLocus (genetics)BiologyGeneticsPhenotypeEpistasisGeneFetal hemoglobinSickle cell anemiaDiseaseCellInternal medicineMedicine

Abstract

fetched live from OpenAlex

Abstract The phenotype of sickle cell anaemia is heterogeneous. Although all patients have the identical sickle haemoglobin mutation, the type, severity and frequency of complications are variable. The products of epistatic modifying genes, along with environmental influences, interact to determine the disease phenotype. Haemoglobin F concentration and its distribution among erythrocytes are likely the most important genetic modulator of disease severity. Polymorphic variation in several genetic loci, including BCL11A in chromosome 2p, the HBS1L‐MYB locus in 6q23 and the C‐T polymorphism 5′ to HBG2 on chromosome 11p, are associated with differences in haemoglobin F gene expression. ZBTB7A in chromosome 19p, along with BCL11A, is a major suppressor of haemoglobin F expression. α ‐Thalassaemia is the other major modulator of sickle cell disease. In addition to haemoglobin F and α ‐thalassaemia, some evidence exists that genes influencing endothelial activation, inflammation, red blood cell hydration and haemostasis might contribute to phenotypic diversity. Key Concepts Sickle cell anaemia is a single‐gene disorder with heterogeneous clinical features. The phenotype of sickle cell anaemia is affected by epistatic modifier genes. Haemoglobin F is the best‐known genetic modifier of sickle cell anaemia. Polymorphisms in three established quantitative trait loci modulate haemoglobin F. High haemoglobin F levels are associated with reduced mortality and the rate of viscosity–vaso‐occlusive complications. The locus of the haemoglobin F effect is the sickle erythrocyte. The distribution of concentrations of haemoglobin F among sickle erythrocytes is likely to be the critical determinant of its clinical effects. Co‐inheritance of α‐thalassaemia is associated with reduced rates of haemolysis and vasculopathic complications, but an increased incidence of viscosity–vaso‐occlusive manifestations. Candidate gene and genome‐wide association studies have identified genes that potentially affect sickle cell disease phenotype by modifying disease pathogenesis. It is likely that many genes, each playing a small role, contribute to the phenotypic heterogeneity of disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.006
Threshold uncertainty score0.020

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0060.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.291
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes1
Has abstractyes

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