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Record W2132067433 · doi:10.1139/x03-050

Families of loblolly pine that are the most stable for resistance to fusiform rust are the least predictable

2003· article· en· W2132067433 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCanadian Journal of Forest Research · 2003
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYeasts and Rust Fungi Studies
Canadian institutionsnot available
FundersAgricultural Research ServiceNorth Carolina State University
KeywordsRust (programming language)BiologyLoblolly pinePredictabilityResistance (ecology)Pinus <genus>BotanyAgronomyStatisticsMathematics

Abstract

fetched live from OpenAlex

In an extensive series of trials with open-pollinated families of loblolly pine (Pinus taeda L.), resistance to fusiform rust disease (caused by Cronartium quercuum (Berk.) Miyabe ex Shirai f. sp. fusiforme) at individual test sites was relatively unpredictable for the families deemed most resistant. The most resistant families were also the most stable for performance across test sites, with stability defined as the slope of the regression of family means for rust infection versus site means for rust infection. A family's R-50 value (its predicted rust infection level when the site mean infection is 50%) was correlated to its stability parameter or slope (r = 0.78). On average, any one family's level of infection (% galled) was reasonably predictable for any given infection level at a given site; the average coefficient of determination (r 2 ) was 0.78 for the regression of family means for rust infection versus site means for rust infection. However, the six most stable families for resistance had the lowest r 2 values (average r 2 = 0.58). We speculated that the lower predictability for the most resistant families was due to interactions of specific resistance genes in these families and corresponding avirulence and (or) virulence levels in the pathogen populations that may differ among sites. Although the predictability of the individual resistant families was relatively low, if these families were bulked into a resistant seed lot, they performed in a more predictable manner with r 2 = 0.74 for the regression of the bulk mean versus site means. Bulks of four to six highly resistant families appeared to be a good solution to obtain stable and predictable performance across a range of sites.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.513
Threshold uncertainty score0.794

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.280
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it