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Record W2132305684 · doi:10.1093/ndt/gfl843

Late-onset acute haemorrhagic necrotizing granulomatous adenovirus tubulointerstitial nephritis in a renal allograft

2007· article· en· W2132305684 on OpenAlexaff
Khaled O. Alsaad, Ana Tobar, Eric C. Bélanger, M Ahmad, Daniel C. Cattran, Andrew M. Herzenberg

Bibliographic record

VenueNephrology Dialysis Transplantation · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVirus-based gene therapy research
Canadian institutionsUniversity of TorontoUniversity Health Network
Fundersnot available
KeywordsMedicineNephritisInterstitial nephritisPathologyKidneyInternal medicine

Abstract

fetched live from OpenAlex

(Section Editor: A. Meyrier) Adenovirus (AV) is a relatively common infection in solid organ transplant recipients, and has a wide clinical presentation and outcome, ranging from subclinical and self-limiting to lethal disease. In renal transplant patients, symptomatic AV infection presents with tubulointerstitial nephritis, acute haemorrhagic cystitis, pneumonia or fatal disseminated viral disease. Most often, AV infection occurs within weeks to months after transplantation, suggesting reactivation of a latent AV in the immunosuppressed recipient as the source of infection. This report describes an unusual case of AV infection in the native lung but also in the renal allograft, 12 years after transplantation. The patient presented with gross haematuria, pain over the kidney allograft, fever and acute renal failure. The late onset of infection suggested de novo infection in an immunosuppressed patient rather than activation of latent infection or donor-origin infection. Renal biopsies showed severe haemorrhagic necrotizing granulomatous tubulointerstitial nephritis. Viral cytopathic changes were present in tubular epithelial cell nuclei, but since the more common polyomavirus immunostaining was negative, a diagnosis of viral infection was not made at the time. The late onset of infection, the presence of a well-defined granulomatous reaction, and the under recognition of adenovirus infection made the clinicopathological diagnosis difficult.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0060.003
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.276
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2007
Admission routes1
Has abstractyes

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