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The Genetic Landscape of a Cell

2010· article· en· 2,247 citations· W2133102806 on OpenAlex· 10.1126/science.1180823

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Canadian affiliationAn author listed a Canadian institution. This is the only route the usual frame has.
Canadian funderA Canadian agency funded it. The work may carry no Canadian affiliation at all.

Machine scores (provisional)

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

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Opus teacher head0.003
GPT teacher head0.203
Teacher spread
0.200 · how far apart the two teachers sit on this one work
Validation status
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Abstract

A genome-scale genetic interaction map was constructed by examining 5.4 million gene-gene pairs for synthetic genetic interactions, generating quantitative genetic interaction profiles for approximately 75% of all genes in the budding yeast, Saccharomyces cerevisiae. A network based on genetic interaction profiles reveals a functional map of the cell in which genes of similar biological processes cluster together in coherent subsets, and highly correlated profiles delineate specific pathways to define gene function. The global network identifies functional cross-connections between all bioprocesses, mapping a cellular wiring diagram of pleiotropy. Genetic interaction degree correlated with a number of different gene attributes, which may be informative about genetic network hubs in other organisms. We also demonstrate that extensive and unbiased mapping of the genetic landscape provides a key for interpretation of chemical-genetic interactions and drug target identification.

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The record

Venue
Science
Topic
Bioinformatics and Genomic Networks
Field
Biochemistry, Genetics and Molecular Biology
Canadian institutions
McGill UniversityLunenfeld-Tanenbaum Research InstituteMount Sinai HospitalYork UniversityUniversity of Toronto
Funders
National Human Genome Research InstituteCanadian Institutes of Health ResearchWellcome Trust
Keywords
BiologyPleiotropyGeneComputational biologyGeneticsSaccharomyces cerevisiaeGenomeGene mappingGene interactionGene regulatory networkBiological networkEvolutionary biologyPhenotypeChromosomeGene expression
Has abstract in OpenAlex
yes