Picante: R tools for integrating phylogenies and ecology
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Abstract
SUMMARY: Picante is a software package that provides a comprehensive set of tools for analyzing the phylogenetic and trait diversity of ecological communities. The package calculates phylogenetic diversity metrics, performs trait comparative analyses, manipulates phenotypic and phylogenetic data, and performs tests for phylogenetic signal in trait distributions, community structure and species interactions. AVAILABILITY: Picante is a package for the R statistical language and environment written in R and C, released under a GPL v2 open-source license, and freely available on the web (http://picante.r-forge.r-project.org) and from CRAN (http://cran.r-project.org).
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The record
- Venue
- Bioinformatics
- Topic
- Ecology and Vegetation Dynamics Studies
- Field
- Environmental Science
- Canadian institutions
- University of British Columbia
- Funders
- Natural Sciences and Engineering Research Council of CanadaGordon and Betty Moore FoundationChinese Academy of SciencesNational Science Foundation
- Keywords
- R packagePhylogenetic treeTraitPhylogenetic diversitySet (abstract data type)LicenseOpen sourceDiversity (politics)Software packageComputer scienceSoftwareBiologyData scienceEcologyEvolutionary biologySociologyProgramming languageAnthropology
- Has abstract in OpenAlex
- yes