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Evidence for alteration of fungal endophyte community assembly by host defense compounds

2009· article· en· W2135437166 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueNew Phytologist · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant and fungal interactions
Canadian institutionsUniversity of Toronto
FundersAgriculture and Agri-Food CanadaNatural Sciences and Engineering Research Council of CanadaAgricultural Research ServiceUniversity of TorontoUniversity of Illinois at Urbana-ChampaignOntario Ministry of Agriculture, Food and Rural AffairsU.S. Department of Agriculture
KeywordsEndophyteHost (biology)SymbiosisBiologyBotanyEcologyBacteriaGenetics

Abstract

fetched live from OpenAlex

* Plant defense compounds are common stressors encountered by endophytes. Fungi readily evolve tolerance to these compounds, yet few studies have addressed the influence of intraspecific variation in defense compound production on endophyte colonization. We compared the influence of defense compound production on the composition of fungal endophyte communities in replicated field experiments. * Maize (Zea mays) produces benzoxazinoids (BXs), compounds with antifungal byproducts persistent in the environment. Fungi were isolated from leaf and root tissue of two maize genotypes that produce BXs, and a natural mutant that does not. Isolates representing the species recovered were tested for tolerance to 2-benzoxazolinone (BOA), a toxic BX byproduct. * In seedling roots and mature leaves, the community proportion with low BOA tolerance was significantly greater in BX nonproducers than producers. Mean isolation frequency of Fusarium species was up to 35 times higher in mature leaves of BX producers than nonproducers. * Fungal species with relatively high tolerance to BOA are more abundant in BX producing than BX nonproducing maize. Production of BXs may increase colonization by Fusarium species in maize, including agents of animal toxicosis and yield-reducing disease in maize. Overall, results indicate that production of defense compounds can significantly alter endophyte community assembly.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.486
Threshold uncertainty score0.212

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.119
GPT teacher head0.315
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it