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Record W2138119536 · doi:10.1139/cjb-2015-0122

A DNA barcode survey of <i>Schizymenia</i> (Nemastomatales, Rhodophyta) in Australia and British Columbia reveals overlooked diversity including <b><i>S. tenuis</i> sp. nov.</b> and <b><i>Predaea borealis</i> sp. nov.</b>

2015· article· en· W2138119536 on OpenAlexafffundvenueabout
Gary W. Saunders, Taylor C. Birch, Kyatt R. Dixon

Bibliographic record

VenueBotany · 2015
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal plant biology
Canadian institutionsUniversity of New Brunswick
FundersParks CanadaGenome Canada
KeywordsBiologyCrustoseSporophyteSensuBotanyGenusDNA barcodingSpecies complexEcologyAlgaePhylogenetic tree

Abstract

fetched live from OpenAlex

This project explored species diversity for the red algal genus Schizymenia in Australia and British Columbia, Canada, for which the only recorded representatives are S. dubyi (Chauvin ex Duby) J. Agardh and S. pacifica (Kylin) Kylin, respectively. Through a combination of CO1-5P, ITS, and rbcL sequence data, we uncovered overlooked diversity in both regions. Australian populations attributed to S. dubyi were actually a mix of an entity from the S. dubyi complex (closest matches for individuals from Argentina and Italy), a second species from the S. apoda (J. Agardh) J. Agardh complex (thus far known from Australia only), and finally individuals of the same S. dubyi mito/ITS-type introgressed with a different S. apoda rbcL type (plastid; closest matches China, Korea, and New Zealand). We resolved a complex of three closely related species for Schizymenia pacifica: Schizymenia pacifica sensu stricto, which is widely distributed in the Northeast Pacific; S. tenuis sp. nov., which is distributed throughout British Columbia with a predominantly northern distribution; and Schizymenia sp._1Cal, which is distributed from California to Oregon. As part of ongoing surveys of crustose red algae, we uncovered crustose sporophytes for three of the six Schizymenia genetic groups resolved here, and the sporophytic phase of a new species of Predaea from northern British Columbia, Predaea borealis sp. nov., for a single crustose (sporophyte) specimen from Haida Gwaii. This last result is particularly surprising, as species of Predaea are typically confined to lower latitudes in both the northern and southern hemispheres.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.079
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.046
GPT teacher head0.235
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2015
Admission routes4
Has abstractyes

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