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Record W2139754987 · doi:10.1086/318080

Immunoprophylactic Potential of Cloned Shiga Toxin 2 B Subunit

2001· article· en· W2139754987 on OpenAlexafffund
Paola Marcato, George L. Mulvey, Randy J. Read, Kathleen Vander Helm, Patrick N. Nation, Glen D. Armstrong

Bibliographic record

VenueThe Journal of Infectious Diseases · 2001
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEscherichia coli research studies
Canadian institutionsUniversity of Alberta
FundersUniversity of Alberta
KeywordsShiga toxinProtein subunitPentamerVero cellBiologyShiga-like toxinSTX2Molecular biologyEscherichia coliGlobotriaosylceramideVirologyInterleukin 10 receptor, alpha subunitMicrobiologyG alpha subunitBiochemistryVirusMedicine

Abstract

fetched live from OpenAlex

The Shiga toxins Stx1 and Stx2 contribute to the development of enterohemorrhagic O157: H7 Escherichia coli-mediated colitis and hemolytic-uremic syndrome in humans.The Stx2 B subunit, which binds to globotriaosylceramide (GB3) receptors on target cells, was cloned.This involved replacing the Stx2 B subunit leader peptide nucleotide sequences with those from the Stx1 B subunit.The construct was expressed in the TOPP3 E. coli strain.The Stx2 B subunits from this strain assembled into a pentamer and bound to a GB3 receptor analogue.The cloned Stx2 B subunit was not cytotoxic to Vero cells or apoptogenic in Burkitt's lymphoma cells.Although their immune response to the Stx2 B subunit was variable, rabbits that developed Stx2 B subunit-specific antibodies, as determined by immunoblot and in vitro cytotoxicity neutralization assays, survived a challenge with Stx2 holotoxin.This is thought to be the first demonstration of the immunoprophylactic potential of the Stx2 B subunit.Enterohemorrhagic Escherichia coli (EHEC) cause hemorrhagic colitis (HC) and, on occasion, hemolytic-uremic syndrome (HUS), a life-threatening complication, in humans [1-4].EHEC are also known as Shiga toxin-producing E. coli (STEC) or Verotoxin-producing E. coli [5].Six different Shiga toxins (Stx) have been described, including one from Shigella dysenteriae, the closely related E. coli Stx1, and the more distantly related E. coli, Stx2, Stx2c, Stx2d, and Stx2e.The E. coli Stx1 and Stx2 are associated with STEC serotypes involved in human infections and are linked to the development of HC and HUS [6].Although all 6 varieties of Stx differ to some degree at the amino acid sequence level [7], these toxins are all multimeric proteins that display a classic AB5 structure [8,9].The Stx B subunits form a toroid-shaped pentamer that, with the exception of the Stx2e B subunit, recognizes globotriaosylceramide (GB3) receptors found on a number of different target cells [10][11][12].After receptor ligation, the host cell internalizes the

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.254
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations85
Published2001
Admission routes2
Has abstractyes

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