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Record W2140353781 · doi:10.1073/pnas.1423147112

An estimate of the number of tropical tree species

2015· article· en· W2140353781 on OpenAlexaff
Ferry Slik, Víctor Arroyo‐Rodríguez, Shin‐ichiro Aiba, Patricia Álvarez-Loayza, Luciana F. Alves, Peter S. Ashton, Patricia Balvanera, Meredith L. Bastian, Peter J. Bellingham, Eduardo van den Berg, Luís Carlos Bernacci, Polyanna da Conceição Bispo, Lilian Blanc, Katrin Böhning‐Gaese, Pascal Boeckx, Frans Bongers, Brad Boyle, Matt Bradford, Francis Q. Brearley, Mireille Breuer‐Ndoundou Hockemba, Sarayudh Bunyavejchewin, Darley C. Leal Matos, Miguel Santiago, Eduardo Luı́s Martins Catharino, Shauna‐Lee Chai, Yukai Chen, Robert K. Colwell, Robin L. Chazdon, Connie J. Clark, David B. Clark, Deborah A. Clark, Heike Culmsee, Kipiro Damas, H. S. Dattaraja, Gilles Dauby, Priya Davidar, Saara J. DeWalt, Jean‐Louis Doucet, Álvaro Duque, Giselda Durigan, Karl A. O. Eichhorn, Pedro V. Eisenlohr, Eduardo Schmidt Eler, Corneille Ewango, Nina Farwig, Kenneth J. Feeley, Leandro Valle Ferreira, Richard Field, Ary Teixeira de Oliveira Filho, Christine Fletcher, Olle Forshed, Geraldo Antônio Daher Corrêa Franco, Gabriella Fredriksson, Thomas R. Gillespie, Jean‐François Gillet, Giriraj Amarnath, Daniel M. Griffith, James Grogan, I. A. U. N. Gunatilleke, David J. Harris, Rhett D. Harrison, Andy Hector, Jürgen Homeier, Nobuo Imai, Akira Itoh, Patrick A. Jansen, Carlos Alfredo Joly, Kuswata Kartawinata, Elizabeth Kearsley, Daniel L. Kelly, David Kenfack, Michael Kessler, Kanehiro Kitayama, Robert M. Kooyman, Eileen Larney, Yves Laumonier, Susan G. W. Laurance, Michael J. Lawes, Iêda Leão do Amaral, Susan G. Letcher, Jeremy Lindsell, Xinghui Lu, Mashhor Mansor, Antti Marjokorpi, Emanuel H. Martin, Henrik Meilby, Felipe P. L. Melo, Daniel J. Metcalfe, Vincent P. Medjibe, Jean Paul Metzger, Jérôme Millet, Dharmalingam Mohandass, Juan Carlos Montero, Márcio de Morisson Valeriano, Badru Mugerwa, Hidetoshi Nagamasu, Reuben Nilus, Susana Ochoa‐Gaona, Onrizal Onrizal, Navendu Page, Pia Parolin, Marc Parren, Narayanaswamy Parthasarathy, Ekananda Paudel, Andrea Permana, María Teresa Fernández Piedade, Nigel C. A. Pitman, Lourens Poorter, Axel Dalberg Poulsen, John R. Poulsen, Jennifer S. Powers, P. Rama Chandra Prasad, Jean‐Philippe Puyravaud, Jean-Claude A. Razafimahaimodison, Jan Reitsma, João Roberto dos Santos, Wilson Roberto Spironello, Hugo Romero‐Saltos, Francesco Rovero, Andes Hamuraby Rozak, Kalle Ruokolainen, Ervan Rutishauser, Felipe Zamborlini Saiter, Philippe Saner, Bráulio Almeida Santos, Fernanda Santos, Swapan Kumar Sarker, Manichanh Satdichanh, Christine B. Schmitt, Jochen Schöngart, Mark Schulze, Márcio Seiji Suganuma, Douglas Sheil, Eduardo da Silva Pinheiro, Plínio Sist, Tariq Stévart, Raman Sukumar, I‐Fang Sun, Trey Sunderland, H. S. Suresh, Eizi Suzuki, Marcelo Tabarelli, Jangwei Tang, Natália Targhetta, Ida Theilade, Duncan W. Thomas, Peguy Tchouto, Johanna Hurtado, Renato Valencia, J.L.C.H. van Valkenburg, Tran Van Do, Rodolfo Vásquez, Hans Verbeeck, V. A. J. Adekunle, Simone Aparecida Vieira, Campbell O. Webb, Timothy J. S. Whitfeld, Serge A. Wich, John Williams, Florian Wittmann, Hannsjoerg Wöll, Xiaobo Yang, Constant Yves Adou Yao, Sandra Yap, Tsuyoshi Yoneda, Rakan A. Zahawi, Rahmad Zakaria, Runguo Zang, Rafael L. Assis, Bruno Garcia Luize, Eduardo Martins Venticinque

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicAfrican Botany and Ecology Studies
Canadian institutionsAlberta Innovates
Fundersnot available
KeywordsTropical diseaseTree (set theory)TropicsTropical climateMathematicsGeographyBiologyEcologyCombinatoricsMedicine

Abstract

fetched live from OpenAlex

The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher's alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between ∼ 40,000 and ∼ 53,000, i.e., at the high end of previous estimates. Contrary to common assumption, the Indo-Pacific region was found to be as species-rich as the Neotropics, with both regions having a minimum of ∼ 19,000-25,000 tree species. Continental Africa is relatively depauperate with a minimum of ∼ 4,500-6,000 tree species. Very few species are shared among the African, American, and the Indo-Pacific regions. We provide a methodological framework for estimating species richness in trees that may help refine species richness estimates of tree-dependent taxa.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.075
GPT teacher head0.306
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations480
Published2015
Admission routes1
Has abstractyes

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Same venueProceedings of the National Academy of SciencesSame topicAfrican Botany and Ecology StudiesFrench-language works237,207