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Record W2141287219 · doi:10.1002/cbic.200600298

Identification of Labile UDP‐Ketosugars in <i>Helicobacter pylori</i>, <i>Campylobacter jejuni</i> and <i>Pseudomonas aeruginosa</i>: Key Metabolites used to make Glycan Virulence Factors

2006· article· en· W2141287219 on OpenAlexaff
David J. McNally, Ian C. Schoenhofen, Erin F. Mulrooney, Dennis M. Whitfield, Evgeny Vinogradov, Joseph S. Lam, Susan M. Logan, Jean‐Robert Brisson

Bibliographic record

VenueChemBioChem · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlycosylation and Glycoproteins Research
Canadian institutionsUniversity of GuelphInstitute for Biological SciencesNational Research Council Canada
Fundersnot available
KeywordsCampylobacter jejuniGlycanVirulenceBacteriaMicrobiologyPseudomonas aeruginosaHelicobacter pyloriChemistryCampylobacterBiochemistryBiologyGeneGeneticsGlycoprotein

Abstract

fetched live from OpenAlex

UDP-hexos-4-ulose sugars occupy a central role in the biosynthesis of lipopolysaccharides, capsular polysaccharides, and antibiotics in bacteria. Little is known about these sugars as they are labile compounds that are produced in minute quantities within the bacterial cell. Examination of the PglF, PseB, WbjB, and WbjC reactions directly with NMR lead to the first detailed structural description of UDP-hexos-4-ulose sugars in various bacteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.029
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.250
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2006
Admission routes1
Has abstractyes

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