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Record W2142001546 · doi:10.1109/crv.2007.11

Automated Detection of Mitosis in Embryonic Tissues

2007· article· en· W2142001546 on OpenAlexaff
Parthipan Siva, G. Wayne Brodland, David A. Clausi

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCell Image Analysis Techniques
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsMitosisComputer scienceEmbryonic stem cellCell biologyBiologyGeneGenetics

Abstract

fetched live from OpenAlex

Characterization of mitosis is important for understanding the mechanisms of development in early stage embryos. In studies of cancer, another situation in which mitosis is of interest, the tissue is stained with contrast agents before mitosis characterization; an intervention that could lead to atypical development in live embryos. A new image processing algorithm that does not rely on the use of contrast agents was developed to detect mitosis in embryonic tissue. Unlike previous approaches that uses still images, the algorithm presented here uses temporal information from time-lapse images to track the deformation of the embryonic tissue and then uses changes in intensity at tracked regions to identify the locations of mitosis. On a one hundred minute image sequence, consisting of twenty images, the algorithm successfully detected eighty-one out of the ninety-five mitosis. The performance of the algorithm is calculated using the geometric mean measure as 82%. Since no other method to count mitoses in live tissues is known, comparisons with the present results could not be made.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.216

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.272
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2007
Admission routes1
Has abstractyes

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