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Extensive Robertsonian polymorphism in the African rodent<i>Gerbillus nigeriae</i>: geographic aspects and meiotic data

2011· article· en· W2143741440 on OpenAlexfundno aff
Karmadine Hima, M. Thiam, Josette Catalan, Philippe Gauthier, Jean‐Marc Duplantier, Sylvain Piry, Mbacké Sembène, Janice Britton‐Davidian, Laurent Granjon, Gauthier Dobigny

Bibliographic record

VenueJournal of Zoology · 2011
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicChromosomal and Genetic Variations
Canadian institutionsnot available
FundersMuséum National d'Histoire NaturelleAgence Universitaire de la FrancophonieAgence Nationale de la Recherche
KeywordsBiologyAraneusShrewEvolutionary biologyHouse mouseSorexHybrid zoneMeiosisRange (aeronautics)IntrogressionLoss of heterozygosityPloidyGeneticsZoologyGenetic variationAlleleGene flowGene

Abstract

fetched live from OpenAlex

Robertsonian (Rb) fusions are one of the most frequent types of chromosomal rearrangements and have greatly contributed to the evolution of mammalian genome architecture. Apart from rare exceptions, investigations at the species level (i.e. polymorphism) are almost exclusively restricted to two mammalian models, namely the house mouse Mus musculus domesticus (2n=22–40) and the common shrew Sorex araneus (2n=20–33). Yet, these two species display important but usually locally restricted Rb polymorphisms. Another rodent species, Gerbillus nigeriae, has also been shown to display a wide range of diploid number variation (2n=60–74) due to Rb polymorphism. However, data about the latter species are rather scarce. We provide here a survey including recapitulation of 137 available karyotypic data that were implemented with 241 new records, thus allowing us to draw the first map of 2n variation throughout the species range. First, truly segregating centric fusions are observed in almost all localities investigated. Moreover, the geographic patterns (from 79 West African localities in total) show that local 2n variations are clearly lower than those observed at a wider scale, thus leading to some spatial structuring that may reflect phylogeographic assemblages. The meiotic study of 13 male specimens allowed us to identify several instances of double and triple Rb heterozygous individuals, and strongly suggested that heterozygosity is more the rule than the exception in the species. From there, it is tempting to speculate that the extraordinary Rb plasticity observed in G. nigeriae may be selectively maintained and confer adaptability to this species, which inhabits unstable Sahelian environments, where it is able to colonize efficiently habitats that undergo rapid human-mediated and/or climatic changes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.257
Threshold uncertainty score0.367

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.220
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2011
Admission routes1
Has abstractyes

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