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Two weather‐based models for predicting the onset of seasonal release of ascospores of <i>Leptosphaeria maculans</i> or <i>L. biglobosa</i>

2007· article· en· W2144407968 on OpenAlexaffabout
Moin U. Salam, Bruce D.L. Fitt, Jean‐Noël Aubertot, Art Diggle, Y. J. Huang, Martin J. Barbetti, P. Gladders, M. Jędryczka, Ravjit Khangura, N. Wratten, W. G. Dilantha Fernando, Annette Penaud, Xavier Pinochet, K. Sivasithamparam

Bibliographic record

VenuePlant Pathology · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversity of Manitoba
FundersBiotechnology and Biological Sciences Research CouncilGrains Research and Development Corporation
KeywordsLeptosphaeria maculansBlacklegBiologyStandard deviationHorticultureStatisticsBrassicaMathematics

Abstract

fetched live from OpenAlex

Weather‐based models (Improved Blackleg Sporacle and SporacleEzy) to predict the date of onset of seasonal release from oilseed rape debris of ascospores of Leptosphaeria maculans or L. biglobosa , causes of phoma stem canker, were developed and tested with data from diverse environments in Australia, Canada, France, Poland and the UK. Parameters were estimated, using the same datasets from experiments in the UK and Poland, with an accuracy of root mean squared deviation ( RMSD ) of 7·4 (with a bias of −4·54, L . maculans ) and 8·5 (with a bias of 0·30, L. biglobosa ) days for Improved Blackleg Sporacle, and of 2·9 (with a bias of −0·06, L . maculans ) and 7·3 (with a bias of −1·18, L. biglobosa ) days for SporacleEzy. When tested with data independent of those used for parameter estimation, overall predictions agreed well with observed data in five countries, both for Improved Blackleg Sporacle ( R 2 = 0·96, slope = 1·00, standard error = 0·03, P > 0·05, n = 46) and SporacleEzy ( R 2 = 0·96, slope = 0·98, standard error = 0·03, P > 0·05, n = 46). However, SporacleEzy performed better in Australia, Canada, Poland and the UK ( RMSD = 10·6, 9·7, 5·4 and 3·4 days, respectively) than Improved Blackleg Sporacle ( RMSD = 11·7, 11·0, 5·6 and 6·5 days, respectively). In contrast, the prediction from Improved Blackleg Sporacle ( RMSD = 8·0 days) was better in France than that from SporacleEzy ( RMSD = 15·9 days). Sensitivity analysis showed that better parameter estimation could improve the quality of prediction of SporacleEzy ( RMSD = 7·6 days) under French conditions. These models are capable of estimating the first seasonal release of ascospores of organisms causing phoma stem canker on oilseed rape under many climates and thus could contribute to development of strategies for control of the disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.036
Threshold uncertainty score0.072

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.254
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations53
Published2007
Admission routes2
Has abstractyes

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