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Accounting for detectability improves estimates of species richness in tropical bat surveys

2011· article· en· W2145030391 on OpenAlex
Christoph F. J. Meyer, Ludmilla Aguiar, Luís F. Aguirre, Júlio Baumgarten, Frank M. Clarke, Jean‐François Cosson, Sergio Estrada Villegas, Jakob Fahr, Deborah Faria, Neil M. Furey, Mickaël Henry, Robert Hodgkison, Richard K. B. Jenkins, Kirsten Jung, Tigga Kingston, Thomas Kunz, María Cristina González, Isabel Izquierdo Moya, Bruce D. Patterson, Jean‐Marc Pons, Paul A. Racey, Katja Rex, Erica M. Sampaio, Sergio Solari, Kathryn E. Stoner, Christian C. Voigt, Dietrich von Staden, Christa D. Weise, Elisabeth K. V. Kalko

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of Applied Ecology · 2011
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBat Biology and Ecology Studies
Canadian institutionsMcGill University
Fundersnot available
KeywordsSpecies richnessEnvironmental scienceGeographyEcologyEconometricsStatisticsMathematicsBiology

Abstract

fetched live from OpenAlex

1. Species richness is a state variable of some interest in monitoring programmes but raw species counts are often biased due to imperfect species detectability. Therefore, monitoring programmes should quantify detectability for target taxa to assess whether it varies over temporal or spatial scales. We assessed the potential for tropical bat monitoring programmes to reliably estimate trends in species richness. 2. Using data from 25 bat assemblages from the Old and New World tropics, we estimated detectability for all species in an assemblage (mean proportion of species detected per sampling plot) and for individual species (species-specific detectability). We further assessed how these estimates of detectability were affected by external sources of variation relating to time, space, survey effort and biological traits. 3. The mean proportion of species detected across 96 sampling plots was estimated at 0·76 (range 0·57–1·00) and was significantly greater for phytophagous than for animalivorous species. Species-averaged detectability for phytophagous species was influenced by the number of surveys and season, whereas the number of surveys and sampling methods [ground- or canopy-level mist nets, harp traps and acoustic sampling (AS)] most strongly affected estimates of detectability for animalivorous bats. Species-specific detectability averaged 0·4 and was highly heterogeneous across 232 species, with estimates ranging from 0·03 to 0·84. Species-level detectability was influenced by a range of external factors such as location, season, or sampling method, suggesting that raw species counts may sometimes be strongly biased. 4. Synthesis and applications. Due to generally high species-specific detection probabilities, Neotropical aerial insectivorous bats proved to be well suited for monitoring using AS. However, for species with low detectability, such as most gleaning animalivores or nectarivores, count data obtained in bat monitoring surveys must be corrected for detection bias. Our results indicate that species-averaged detection probabilities will rarely approach 1 unless many surveys are conducted. Consequently, long-term bat monitoring programmes need to adopt an estimation scheme that corrects for variation in detectability when comparing species richness over time and when making regional comparisons. Similar corrections will be needed for other species-rich tropical taxa.

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Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.077
Threshold uncertainty score0.182

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.223
Teacher spread0.191 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it