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Record W2147938161 · doi:10.1094/pdis-93-7-0763b

First European Report of a Leaf Spot on Common Ragweed (<i>Ambrosia artemisiifolia</i>) Caused by a <i>Phoma</i> sp.

2009· article· en· W2147938161 on OpenAlexaboutno aff
G. Bohár, K. Varga Bohár, Alexandra Pintye, Levente Kiss

Bibliographic record

VenuePlant Disease · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
Fundersnot available
KeywordsPhomaBiologyBotanyInternal transcribed spacerConidiumGenBankLeaf spotPycnidiumMyceliumAmbrosia artemisiifoliaRagweedRibosomal RNA

Abstract

fetched live from OpenAlex

Common ragweed, native to North America, has recently become invasive in some parts of Europe. In Hungary, it has become the most widespread agricultural weed species and the most important producer of allergenic pollen since the 1990s. During surveys for its fungal plant pathogens to be evaluated as potential biological control agents (1), ragweed plants exhibiting necrotic spots on the leaves and stems were repeatedly found in Heves and Vas counties in Hungary in September 2004 and 2006. Numerous globose and ostiolate pycnidia, 68 to 115 μm in diameter, containing hyaline, unicellular conidia, 3 to 8 μm long, were found in necrotic tissues. On the basis of these characteristics, the fungus was identified as a Phoma sp., and 21 isolates were obtained on Czapek-Dox medium supplemented with 2% malt and 0.5% tetracycline in 2004 and 2006. Two well-sporulating isolates, designated Ph-5 and Ph-17, were selected for further studies. DNA was extracted from mycelium with a Qiagen DNeasy Plant Kit (Hilden, Germany) and the rDNA internal transcribed spacer (ITS) sequences were amplified and determined as described by Szentiványi et al. (2). The ITS sequences were identical in these two isolates and were 97 to 98% similar to those of Didymella bryoniae (anamorph Phoma cucurbitacearum), a pathogen of cucurbits, and also to those of other Phoma spp. No ITS sequences identical to those determined in Phoma isolates Ph-5 and Ph-17 were found in GenBank. Sequence data were deposited in GenBank (No. FJ794609). To test the pathogenicity of Ph-17 grown on Czapek-Dox medium with 2% malt, a 2 to 6 × 105 conidia/ml aqueous suspension was used to inoculate 2-month-old potted ragweed plants and 1-month-old cucumber cv. Rajnai fürtös, bottle gourd (Lagenaria leucantha) cv. Minibottle, and watermelon (Citrullus lanatus) cv. Sugar Baby, which were all grown from seeds in a greenhouse. Plants were kept in transparent plastic chambers for 6 weeks. Five pots with one to three plants each were used for each plant species tested and the experiment was carried out twice. Noninoculated plants, two pots with one to three individuals for each species kept in the same way, served as controls. Necrotic spots with pycnidia developed on 38 to 47% of the leaves of all inoculated ragweed plants 18 to 25 days after inoculation, whereas all the cucurbitaceous plants tested, as well as the control ragweed plants, did not develop disease symptoms. Although the Phoma isolate Ph-17 was, based on ITS sequence data, closely related to D. bryoniae, it was not pathogenic to cucurbits. The pathogen was reisolated from two diseased ragweed plants. Several Phoma spp. strains were isolated from Ambrosia artemisiifolia in the United States and Canada (3,4), but to our knowledge, none were isolated outside North America. One of the strains has already been used as a potential biological control agent of ragweed in Canada, but then lost its virulence in culture (3). The biocontrol potential of the Hungarian Phoma sp. isolate Ph-17 against A. artemisiifolia is currently being investigated. To our knowledge, this is the first report of a Phoma sp. on A. artemisiifolia in Europe. References: (1) L. Kiss. Biocontrol Sci. Technol. 17:535, 2007. (2) O. Szentiványi et al. Mycol. Res. 109:429, 2005. (3) M. P. Teshler et al. Ambrosia artemisiifolia L., Common Ragweed (Asteraceae) in: Biological Control Programmes in Canada, 1981-2000. CABI, Wallingford, UK, 2002. (4) L. Zhou et al. Mycologia 97:612, 2005.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.213
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations2
Published2009
Admission routes1
Has abstractyes

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