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STAMP: statistical analysis of taxonomic and functional profiles

2014· article· en· 4,314 citations· W2153109441 on OpenAlex· 10.1093/bioinformatics/btu494

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Abstract

UNLABELLED: STAMP is a graphical software package that provides statistical hypothesis tests and exploratory plots for analysing taxonomic and functional profiles. It supports tests for comparing pairs of samples or samples organized into two or more treatment groups. Effect sizes and confidence intervals are provided to allow critical assessment of the biological relevancy of test results. A user-friendly graphical interface permits easy exploration of statistical results and generation of publication-quality plots. AVAILABILITY AND IMPLEMENTATION: STAMP is licensed under the GNU GPL. Python source code and binaries are available from our website at: http://kiwi.cs.dal.ca/Software/STAMP.

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The record

Venue
Bioinformatics
Topic
Statistical Methods in Clinical Trials
Field
Mathematics
Canadian institutions
Dalhousie University
Funders
Keywords
Python (programming language)Computer scienceGraphical user interfaceSoftwareR packageExploratory data analysisStatistical analysisData miningSource codeSoftware packageInformation retrievalProgramming languageStatisticsMathematics
Has abstract in OpenAlex
yes